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Protein

Zinc finger transcription factor family protein 17

Gene

ztf-17

Organism
Caenorhabditis elegans
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • RNA polymerase II regulatory region sequence-specific DNA binding Source: WormBase

Names & Taxonomyi

Protein namesi
Recommended name:
Zinc finger transcription factor family protein 17
Gene namesi
Name:ztf-17
ORF Names:T09A5.12
OrganismiCaenorhabditis elegans
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome II

Organism-specific databases

WormBaseiT09A5.12; CE44970; WBGene00011639; ztf-17.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000654571 – 705Zinc finger transcription factor family protein 17Add BLAST705

Proteomic databases

PaxDbiP45972.

Expressioni

Gene expression databases

BgeeiWBGene00011639.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
eps-8G5ED333EBI-319208,EBI-2315916

Protein-protein interaction databases

BioGridi39602. 7 interactors.
DIPiDIP-25547N.
IntActiP45972. 9 interactors.
MINTiMINT-1096551.
STRINGi6239.T09A5.12.1.

Structurei

3D structure databases

SMRiP45972.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG410K7W7. Eukaryota.
ENOG4110M0B. LUCA.
HOGENOMiHOG000016668.
InParanoidiP45972.
OMAiRETHAVE.
OrthoDBiEOG091G03EX.

Family and domain databases

InterProiView protein in InterPro
IPR013087. Znf_C2H2_type.
SMARTiView protein in SMART
SM00355. ZnF_C2H2. 2 hits.

Sequencei

Sequence statusi: Complete.

P45972-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLRYQASVYG DSYGNDYHLP VQGPSTIASS NGLRSQQSKI IKRPPTNYKS
60 70 80 90 100
IPACRLAPRR RLFVADGNGV QKSMTSSSGV TFPPPDYMKK MKENYESGKI
110 120 130 140 150
IYIRRNNPGM KGNQMTGRLT TINSSIRAPS YHATSMSAGS VTLDTSGSAP
160 170 180 190 200
KYVYRLPKAE YGNKFDENRP ASNMYVPAQE PPKQHFTTVP ACMSMGGEVV
210 220 230 240 250
FEEELDDEIA DLGADELTGD GFNADKSPKS ESPDPYLKSS GPLVQPCMTS
260 270 280 290 300
KSPSYNLLQR NRLQTSRFAC PQQDCFWRGT NEMSMKKHML VHGPKQPVIY
310 320 330 340 350
DKTGEAMKVQ LVQPKPKGVK CSECDTFAYS RPLLLRHMYD SHGIEAPLVK
360 370 380 390 400
RTFANREMLQ SWLDSLRETH AVEFVVSSGS KKWGRGLQVH YLTCSRSGDQ
410 420 430 440 450
KERPNKKYVR PPRPSIKCGR NCMAYLKIKQ NPTVSELQIE GCLHHSGHEI
460 470 480 490 500
DHTRMVLESN ELASIGAIVD AVNEGVDVLG NVETIRSYLG SSGRFRLVTE
510 520 530 540 550
NGLIEQMPIW FEQYHRDMAA FNGTGYRNNS GPIPITNPYL SMTMKPSING
560 570 580 590 600
NRRLPYSGMT IKKELESITM KKAVPIRFNG GQLQNLEMNS SIEEYDESKV
610 620 630 640 650
KIEMDDEDAL ATQSILKDDF EEFKTEDLFG LGGGDDEILC GGEEASGVTS
660 670 680 690 700
NIDGILAANL PDNFNDPLCG MDLATDFSGP FDDDVFDELL GLTNFNDRHN

NLNIS
Length:705
Mass (Da):78,529
Last modified:July 27, 2011 - v3
Checksum:i7684C556F2388B7D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z36753 Genomic DNA. Translation: CAA85341.2.
PIRiT24727.
RefSeqiNP_495656.2. NM_063255.5.
UniGeneiCel.17333.

Genome annotation databases

EnsemblMetazoaiT09A5.12.1; T09A5.12.1; WBGene00011639.
T09A5.12.2; T09A5.12.2; WBGene00011639.
GeneIDi174269.
KEGGicel:CELE_T09A5.12.
UCSCiT09A5.12.1. c. elegans.

Similar proteinsi

Entry informationi

Entry nameiZTF17_CAEEL
AccessioniPrimary (citable) accession number: P45972
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: July 27, 2011
Last modified: October 25, 2017
This is version 99 of the entry and version 3 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Caenorhabditis elegans
    Caenorhabditis elegans: entries, gene names and cross-references to WormBase