Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

P45972

- ZTF17_CAEEL

UniProt

P45972 - ZTF17_CAEEL

Protein

Zinc finger transcription factor family protein 17

Gene

ztf-17

Organism
Caenorhabditis elegans
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 82 (11 Jun 2014)
      Sequence version 3 (27 Jul 2011)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. nucleic acid binding Source: InterPro
    2. protein binding Source: IntAct

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Zinc finger transcription factor family protein 17
    Gene namesi
    Name:ztf-17
    ORF Names:T09A5.12
    OrganismiCaenorhabditis elegans
    Taxonomic identifieri6239 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
    ProteomesiUP000001940: Chromosome II

    Organism-specific databases

    WormBaseiT09A5.12; CE44970; WBGene00011639; ztf-17.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 705705Zinc finger transcription factor family protein 17PRO_0000065457Add
    BLAST

    Proteomic databases

    PaxDbiP45972.

    Interactioni

    Binary interactionsi

    WithEntry#Exp.IntActNotes
    eps-8G5ED333EBI-319208,EBI-2315916

    Protein-protein interaction databases

    DIPiDIP-25547N.
    IntActiP45972. 9 interactions.
    MINTiMINT-1096551.
    STRINGi6239.T09A5.12.2.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG281463.
    HOGENOMiHOG000016668.
    InParanoidiP45972.
    OMAiRETHAVE.
    OrthoDBiEOG72NRQV.

    Family and domain databases

    Gene3Di3.30.160.60. 1 hit.
    InterProiIPR015880. Znf_C2H2-like.
    IPR013087. Znf_C2H2/integrase_DNA-bd.
    [Graphical view]
    SMARTiSM00355. ZnF_C2H2. 2 hits.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P45972-1 [UniParc]FASTAAdd to Basket

    « Hide

    MLRYQASVYG DSYGNDYHLP VQGPSTIASS NGLRSQQSKI IKRPPTNYKS    50
    IPACRLAPRR RLFVADGNGV QKSMTSSSGV TFPPPDYMKK MKENYESGKI 100
    IYIRRNNPGM KGNQMTGRLT TINSSIRAPS YHATSMSAGS VTLDTSGSAP 150
    KYVYRLPKAE YGNKFDENRP ASNMYVPAQE PPKQHFTTVP ACMSMGGEVV 200
    FEEELDDEIA DLGADELTGD GFNADKSPKS ESPDPYLKSS GPLVQPCMTS 250
    KSPSYNLLQR NRLQTSRFAC PQQDCFWRGT NEMSMKKHML VHGPKQPVIY 300
    DKTGEAMKVQ LVQPKPKGVK CSECDTFAYS RPLLLRHMYD SHGIEAPLVK 350
    RTFANREMLQ SWLDSLRETH AVEFVVSSGS KKWGRGLQVH YLTCSRSGDQ 400
    KERPNKKYVR PPRPSIKCGR NCMAYLKIKQ NPTVSELQIE GCLHHSGHEI 450
    DHTRMVLESN ELASIGAIVD AVNEGVDVLG NVETIRSYLG SSGRFRLVTE 500
    NGLIEQMPIW FEQYHRDMAA FNGTGYRNNS GPIPITNPYL SMTMKPSING 550
    NRRLPYSGMT IKKELESITM KKAVPIRFNG GQLQNLEMNS SIEEYDESKV 600
    KIEMDDEDAL ATQSILKDDF EEFKTEDLFG LGGGDDEILC GGEEASGVTS 650
    NIDGILAANL PDNFNDPLCG MDLATDFSGP FDDDVFDELL GLTNFNDRHN 700
    NLNIS 705
    Length:705
    Mass (Da):78,529
    Last modified:July 27, 2011 - v3
    Checksum:i7684C556F2388B7D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Z36753 Genomic DNA. Translation: CAA85341.2.
    PIRiT24727.
    RefSeqiNP_495656.2. NM_063255.5.
    UniGeneiCel.17333.

    Genome annotation databases

    EnsemblMetazoaiT09A5.12.1; T09A5.12.1; WBGene00011639.
    T09A5.12.2; T09A5.12.2; WBGene00011639.
    GeneIDi174269.
    KEGGicel:CELE_T09A5.12.
    UCSCiT09A5.12.1. c. elegans.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Z36753 Genomic DNA. Translation: CAA85341.2 .
    PIRi T24727.
    RefSeqi NP_495656.2. NM_063255.5.
    UniGenei Cel.17333.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    DIPi DIP-25547N.
    IntActi P45972. 9 interactions.
    MINTi MINT-1096551.
    STRINGi 6239.T09A5.12.2.

    Proteomic databases

    PaxDbi P45972.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblMetazoai T09A5.12.1 ; T09A5.12.1 ; WBGene00011639 .
    T09A5.12.2 ; T09A5.12.2 ; WBGene00011639 .
    GeneIDi 174269.
    KEGGi cel:CELE_T09A5.12.
    UCSCi T09A5.12.1. c. elegans.

    Organism-specific databases

    CTDi 174269.
    WormBasei T09A5.12 ; CE44970 ; WBGene00011639 ; ztf-17.

    Phylogenomic databases

    eggNOGi NOG281463.
    HOGENOMi HOG000016668.
    InParanoidi P45972.
    OMAi RETHAVE.
    OrthoDBi EOG72NRQV.

    Miscellaneous databases

    NextBioi 883307.

    Family and domain databases

    Gene3Di 3.30.160.60. 1 hit.
    InterProi IPR015880. Znf_C2H2-like.
    IPR013087. Znf_C2H2/integrase_DNA-bd.
    [Graphical view ]
    SMARTi SM00355. ZnF_C2H2. 2 hits.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
      The C. elegans sequencing consortium
      Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Bristol N2.

    Entry informationi

    Entry nameiZTF17_CAEEL
    AccessioniPrimary (citable) accession number: P45972
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 1, 1995
    Last sequence update: July 27, 2011
    Last modified: June 11, 2014
    This is version 82 of the entry and version 3 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programCaenorhabditis annotation project

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Caenorhabditis elegans
      Caenorhabditis elegans: entries, gene names and cross-references to WormBase

    External Data

    Dasty 3