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P45972 (ZTF17_CAEEL) Reviewed, UniProtKB/Swiss-Prot

Last modified June 11, 2014. Version 82. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Interactions·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Zinc finger transcription factor family protein 17
Gene names
Name:ztf-17
ORF Names:T09A5.12
OrganismCaenorhabditis elegans [Reference proteome]
Taxonomic identifier6239 [NCBI]
Taxonomic lineageEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis

Protein attributes

Sequence length705 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Binary interactions

With

Entry

#Exp.

IntAct

Notes

eps-8G5ED333EBI-319208,EBI-2315916

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 705705Zinc finger transcription factor family protein 17
PRO_0000065457

Sequences

Sequence LengthMass (Da)Tools
P45972 [UniParc].

Last modified July 27, 2011. Version 3.
Checksum: 7684C556F2388B7D

FASTA70578,529
        10         20         30         40         50         60 
MLRYQASVYG DSYGNDYHLP VQGPSTIASS NGLRSQQSKI IKRPPTNYKS IPACRLAPRR 

        70         80         90        100        110        120 
RLFVADGNGV QKSMTSSSGV TFPPPDYMKK MKENYESGKI IYIRRNNPGM KGNQMTGRLT 

       130        140        150        160        170        180 
TINSSIRAPS YHATSMSAGS VTLDTSGSAP KYVYRLPKAE YGNKFDENRP ASNMYVPAQE 

       190        200        210        220        230        240 
PPKQHFTTVP ACMSMGGEVV FEEELDDEIA DLGADELTGD GFNADKSPKS ESPDPYLKSS 

       250        260        270        280        290        300 
GPLVQPCMTS KSPSYNLLQR NRLQTSRFAC PQQDCFWRGT NEMSMKKHML VHGPKQPVIY 

       310        320        330        340        350        360 
DKTGEAMKVQ LVQPKPKGVK CSECDTFAYS RPLLLRHMYD SHGIEAPLVK RTFANREMLQ 

       370        380        390        400        410        420 
SWLDSLRETH AVEFVVSSGS KKWGRGLQVH YLTCSRSGDQ KERPNKKYVR PPRPSIKCGR 

       430        440        450        460        470        480 
NCMAYLKIKQ NPTVSELQIE GCLHHSGHEI DHTRMVLESN ELASIGAIVD AVNEGVDVLG 

       490        500        510        520        530        540 
NVETIRSYLG SSGRFRLVTE NGLIEQMPIW FEQYHRDMAA FNGTGYRNNS GPIPITNPYL 

       550        560        570        580        590        600 
SMTMKPSING NRRLPYSGMT IKKELESITM KKAVPIRFNG GQLQNLEMNS SIEEYDESKV 

       610        620        630        640        650        660 
KIEMDDEDAL ATQSILKDDF EEFKTEDLFG LGGGDDEILC GGEEASGVTS NIDGILAANL 

       670        680        690        700 
PDNFNDPLCG MDLATDFSGP FDDDVFDELL GLTNFNDRHN NLNIS 

« Hide

References

[1]"Genome sequence of the nematode C. elegans: a platform for investigating biology."
The C. elegans sequencing consortium
Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Bristol N2.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
Z36753 Genomic DNA. Translation: CAA85341.2.
PIRT24727.
RefSeqNP_495656.2. NM_063255.5.
UniGeneCel.17333.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

DIPDIP-25547N.
IntActP45972. 9 interactions.
MINTMINT-1096551.
STRING6239.T09A5.12.2.

Proteomic databases

PaxDbP45972.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaT09A5.12.1; T09A5.12.1; WBGene00011639.
T09A5.12.2; T09A5.12.2; WBGene00011639.
GeneID174269.
KEGGcel:CELE_T09A5.12.
UCSCT09A5.12.1. c. elegans.

Organism-specific databases

CTD174269.
WormBaseT09A5.12; CE44970; WBGene00011639; ztf-17.

Phylogenomic databases

eggNOGNOG281463.
HOGENOMHOG000016668.
InParanoidP45972.
OMARETHAVE.
OrthoDBEOG72NRQV.

Family and domain databases

Gene3D3.30.160.60. 1 hit.
InterProIPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
SMARTSM00355. ZnF_C2H2. 2 hits.
[Graphical view]
ProtoNetSearch...

Other

NextBio883307.

Entry information

Entry nameZTF17_CAEEL
AccessionPrimary (citable) accession number: P45972
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: July 27, 2011
Last modified: June 11, 2014
This is version 82 of the entry and version 3 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Relevant documents

Caenorhabditis elegans

Caenorhabditis elegans: entries, gene names and cross-references to WormBase