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P45972

- ZTF17_CAEEL

UniProt

P45972 - ZTF17_CAEEL

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Protein

Zinc finger transcription factor family protein 17

Gene
ztf-17, T09A5.12
Organism
Caenorhabditis elegans
Status
Reviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. nucleic acid binding Source: InterPro
  2. protein binding Source: IntAct
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Zinc finger transcription factor family protein 17
Gene namesi
Name:ztf-17
ORF Names:T09A5.12
OrganismiCaenorhabditis elegans
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
ProteomesiUP000001940: Chromosome II

Organism-specific databases

WormBaseiT09A5.12; CE44970; WBGene00011639; ztf-17.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 705705Zinc finger transcription factor family protein 17PRO_0000065457Add
BLAST

Proteomic databases

PaxDbiP45972.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
eps-8G5ED333EBI-319208,EBI-2315916

Protein-protein interaction databases

DIPiDIP-25547N.
IntActiP45972. 9 interactions.
MINTiMINT-1096551.
STRINGi6239.T09A5.12.2.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG281463.
HOGENOMiHOG000016668.
InParanoidiP45972.
OMAiRETHAVE.
OrthoDBiEOG72NRQV.

Family and domain databases

Gene3Di3.30.160.60. 1 hit.
InterProiIPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
SMARTiSM00355. ZnF_C2H2. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P45972-1 [UniParc]FASTAAdd to Basket

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MLRYQASVYG DSYGNDYHLP VQGPSTIASS NGLRSQQSKI IKRPPTNYKS    50
IPACRLAPRR RLFVADGNGV QKSMTSSSGV TFPPPDYMKK MKENYESGKI 100
IYIRRNNPGM KGNQMTGRLT TINSSIRAPS YHATSMSAGS VTLDTSGSAP 150
KYVYRLPKAE YGNKFDENRP ASNMYVPAQE PPKQHFTTVP ACMSMGGEVV 200
FEEELDDEIA DLGADELTGD GFNADKSPKS ESPDPYLKSS GPLVQPCMTS 250
KSPSYNLLQR NRLQTSRFAC PQQDCFWRGT NEMSMKKHML VHGPKQPVIY 300
DKTGEAMKVQ LVQPKPKGVK CSECDTFAYS RPLLLRHMYD SHGIEAPLVK 350
RTFANREMLQ SWLDSLRETH AVEFVVSSGS KKWGRGLQVH YLTCSRSGDQ 400
KERPNKKYVR PPRPSIKCGR NCMAYLKIKQ NPTVSELQIE GCLHHSGHEI 450
DHTRMVLESN ELASIGAIVD AVNEGVDVLG NVETIRSYLG SSGRFRLVTE 500
NGLIEQMPIW FEQYHRDMAA FNGTGYRNNS GPIPITNPYL SMTMKPSING 550
NRRLPYSGMT IKKELESITM KKAVPIRFNG GQLQNLEMNS SIEEYDESKV 600
KIEMDDEDAL ATQSILKDDF EEFKTEDLFG LGGGDDEILC GGEEASGVTS 650
NIDGILAANL PDNFNDPLCG MDLATDFSGP FDDDVFDELL GLTNFNDRHN 700
NLNIS 705
Length:705
Mass (Da):78,529
Last modified:July 27, 2011 - v3
Checksum:i7684C556F2388B7D
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
Z36753 Genomic DNA. Translation: CAA85341.2.
PIRiT24727.
RefSeqiNP_495656.2. NM_063255.5.
UniGeneiCel.17333.

Genome annotation databases

EnsemblMetazoaiT09A5.12.1; T09A5.12.1; WBGene00011639.
T09A5.12.2; T09A5.12.2; WBGene00011639.
GeneIDi174269.
KEGGicel:CELE_T09A5.12.
UCSCiT09A5.12.1. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
Z36753 Genomic DNA. Translation: CAA85341.2 .
PIRi T24727.
RefSeqi NP_495656.2. NM_063255.5.
UniGenei Cel.17333.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

DIPi DIP-25547N.
IntActi P45972. 9 interactions.
MINTi MINT-1096551.
STRINGi 6239.T09A5.12.2.

Proteomic databases

PaxDbi P45972.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblMetazoai T09A5.12.1 ; T09A5.12.1 ; WBGene00011639 .
T09A5.12.2 ; T09A5.12.2 ; WBGene00011639 .
GeneIDi 174269.
KEGGi cel:CELE_T09A5.12.
UCSCi T09A5.12.1. c. elegans.

Organism-specific databases

CTDi 174269.
WormBasei T09A5.12 ; CE44970 ; WBGene00011639 ; ztf-17.

Phylogenomic databases

eggNOGi NOG281463.
HOGENOMi HOG000016668.
InParanoidi P45972.
OMAi RETHAVE.
OrthoDBi EOG72NRQV.

Miscellaneous databases

NextBioi 883307.

Family and domain databases

Gene3Di 3.30.160.60. 1 hit.
InterProi IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view ]
SMARTi SM00355. ZnF_C2H2. 2 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    The C. elegans sequencing consortium
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2.

Entry informationi

Entry nameiZTF17_CAEEL
AccessioniPrimary (citable) accession number: P45972
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: July 27, 2011
Last modified: June 11, 2014
This is version 82 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Caenorhabditis elegans
    Caenorhabditis elegans: entries, gene names and cross-references to WormBase

External Data

Dasty 3

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