P45968 (YNZ8_CAEEL) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Chromo domain-containing protein T09A5.8

Gene names

ORF Names:

T09A5.8

Organism

Caenorhabditis elegans [Reference proteome]

Taxonomic identifier

6239 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Protostomia › Ecdysozoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	339 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Subcellular location	Nucleus Potential.
Sequence similarities	Contains 1 chromo domain.

Ontologies

Keywords
Cellular component	Nucleus
Ligand	DNA-binding
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	DNA methylation Inferred from electronic annotation. Source: InterPro
Cellular_component	nucleus Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular_function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW methyltransferase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 339	339	Chromo domain-containing protein T09A5.8		PRO_0000080243
Regions
	Domain	24 – 84	61	Chromo

Sequences

	Sequence		Length	Mass (Da)
	P45968 [UniParc]. Last modified November 1, 1995. Version 1. Checksum: 9396D2A18C404241	FASTA	339	37,736
	10 20 30 40 50 60 MSNEGSREES REPEAREGKS DEIFEVEKIL AHKVTDNLLV LQVRWLGYGA DEDTWEPEED 70 80 90 100 110 120 LQECASEVVA EYYKKLKVTD KTELIELLQK QIKKNKSQKS KKRSKTVSDH ESNHDSDGSY 130 140 150 160 170 180 GTPKTSKKSK KSAKNETPVS SKVPKVPTKA ALKSYEATVS GPVAPNNAKK AAMEVRDTRR 190 200 210 220 230 240 NWLDEESSDD EAETTAPLSD VEKIASKVKV VKAVEEKAEE PVKRPSTPPK PREVVIKKDP 250 260 270 280 290 300 SESPVASASS VIPTSKRKSI NAETSNGRQR TLAPPVIVKD ETTWTVDGIA RHTDVDNTKT 310 320 330 KLILMTNSAT GERKVVEGRE AFELDGWALA KYLLDRCEF

References

[1]	"Genome sequence of the nematode C. elegans: a platform for investigating biology." The C. elegans sequencing consortium Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bristol N2.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	Z36753 Genomic DNA. Translation: CAA85339.1.
PIR	T24725.
RefSeq	NP_495652.1. NM_063251.6.
3D structure databases
ProteinModelPortal	P45968.
SMR	P45968. Positions 22-76.
ModBase	Search...
Protein-protein interaction databases
STRING	6239.T09A5.8.
Proteomic databases
PaxDb	P45968.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblMetazoa	T09A5.8; T09A5.8; T09A5.8.
GeneID	174265.
KEGG	cel:CELE_T09A5.8.
UCSC	T09A5.8. c. elegans.
Organism-specific databases
CTD	174265.
WormBase	T09A5.8; CE01089; WBGene00011636.
Phylogenomic databases
eggNOG	NOG277048.
GeneTree	ENSGT00510000046310.
HOGENOM	HOG000016666.
InParanoid	P45968.
OMA	YLLDRCE.
Family and domain databases
InterPro	IPR001525. C5_MeTfrase. IPR023780. Chromo_domain. IPR000953. Chromo_domain/shadow. IPR016197. Chromodomain-like. IPR023779. Chromodomain_CS. [Graphical view]
PANTHER	PTHR10629. PTHR10629. 1 hit.
Pfam	PF00385. Chromo. 1 hit. [Graphical view]
SMART	SM00298. CHROMO. 1 hit. [Graphical view]
SUPFAM	SSF54160. Chromodomain-like. 1 hit.
PROSITE	PS00598. CHROMO_1. 1 hit. PS50013. CHROMO_2. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	883291.

Entry information

Entry name

YNZ8_CAEEL

Accession

Primary (citable) accession number: P45968

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 1, 1995
Last sequence update:	November 1, 1995
Last modified:	May 1, 2013
This is version 85 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Caenorhabditis annotation project