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Protein

Uncharacterized protein YqbG

Gene

yqbG

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciBSUB:BSU26120-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YqbG
Gene namesi
Name:yqbG
Ordered Locus Names:BSU26120
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 131131Uncharacterized protein YqbGPRO_0000049758Add
BLAST

Proteomic databases

PaxDbiP45923.

Interactioni

Subunit structurei

Monomer.1 Publication

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100014291.

Structurei

Secondary structure

1
131
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi6 – 127Combined sources
Helixi16 – 205Combined sources
Helixi23 – 4119Combined sources
Helixi48 – 503Combined sources
Helixi55 – 7016Combined sources
Beta strandi73 – 764Combined sources
Beta strandi87 – 893Combined sources
Helixi105 – 1084Combined sources
Helixi109 – 1113Combined sources
Helixi125 – 1306Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1XN8NMR-A1-131[»]
1ZTSNMR-A1-131[»]
ProteinModelPortaliP45923.
SMRiP45923. Positions 1-131.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP45923.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000100189.
OMAiYTTEKIG.
OrthoDBiEOG6M3PK5.

Family and domain databases

Gene3Di1.10.3230.10. 1 hit.
InterProiIPR013514. DUF3199_YqbG.
[Graphical view]
PfamiPF11436. DUF3199. 1 hit.
[Graphical view]
SUPFAMiSSF116915. SSF116915. 1 hit.

Sequencei

Sequence statusi: Complete.

P45923-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLLITPDELK SYSVFESVKT RPDELLKQDI LEATADIILK VGHDFSDAEY
60 70 80 90 100
IPLPETVRLA LLKLSQFYAL INGDESIIKG YTTEKIGDYS YTLGDGSSLQ
110 120 130
KPDVYALIKD YVKPADPDLE GIEAKVRMRS I
Length:131
Mass (Da):14,687
Last modified:July 7, 2009 - v2
Checksum:i96F3D46F0999C22F
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti98 – 981S → P in BAA06940 (PubMed:7704261).Curated
Sequence conflicti98 – 981S → P in BAA12402 (PubMed:8969508).Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D32216 Genomic DNA. Translation: BAA06940.1.
D84432 Genomic DNA. Translation: BAA12402.1.
AL009126 Genomic DNA. Translation: CAB14553.2.
PIRiB69947.
RefSeqiNP_390489.2. NC_000964.3.
WP_004398566.1. NZ_JNCM01000036.1.

Genome annotation databases

EnsemblBacteriaiCAB14553; CAB14553; BSU26120.
GeneIDi937739.
KEGGibsu:BSU26120.
PATRICi18977068. VBIBacSub10457_2723.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D32216 Genomic DNA. Translation: BAA06940.1.
D84432 Genomic DNA. Translation: BAA12402.1.
AL009126 Genomic DNA. Translation: CAB14553.2.
PIRiB69947.
RefSeqiNP_390489.2. NC_000964.3.
WP_004398566.1. NZ_JNCM01000036.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1XN8NMR-A1-131[»]
1ZTSNMR-A1-131[»]
ProteinModelPortaliP45923.
SMRiP45923. Positions 1-131.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100014291.

Proteomic databases

PaxDbiP45923.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB14553; CAB14553; BSU26120.
GeneIDi937739.
KEGGibsu:BSU26120.
PATRICi18977068. VBIBacSub10457_2723.

Phylogenomic databases

HOGENOMiHOG000100189.
OMAiYTTEKIG.
OrthoDBiEOG6M3PK5.

Enzyme and pathway databases

BioCyciBSUB:BSU26120-MONOMER.

Miscellaneous databases

EvolutionaryTraceiP45923.

Family and domain databases

Gene3Di1.10.3230.10. 1 hit.
InterProiIPR013514. DUF3199_YqbG.
[Graphical view]
PfamiPF11436. DUF3199. 1 hit.
[Graphical view]
SUPFAMiSSF116915. SSF116915. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Complete nucleotide sequence of a skin element excised by DNA rearrangement during sporulation in Bacillus subtilis."
    Takemaru K., Mizuno M., Sato T., Takeuchi M., Kobayashi Y.
    Microbiology 141:323-327(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: 168 / JH642.
  2. "Systematic sequencing of the 283 kb 210 degrees-232 degrees region of the Bacillus subtilis genome containing the skin element and many sporulation genes."
    Mizuno M., Masuda S., Takemaru K., Hosono S., Sato T., Takeuchi M., Kobayashi Y.
    Microbiology 142:3103-3111(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: 168 / JH642.
  3. "The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
    Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V.
    , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
    Nature 390:249-256(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 168.
  4. "From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later."
    Barbe V., Cruveiller S., Kunst F., Lenoble P., Meurice G., Sekowska A., Vallenet D., Wang T., Moszer I., Medigue C., Danchin A.
    Microbiology 155:1758-1775(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: SEQUENCE REVISION TO 98.
  5. "Analysis of a Bacillus subtilis genome fragment using a co-operative computer system prototype."
    Medigue C., Moszer I., Viari A., Danchin A.
    Gene 165:GC37-GC51(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION.
  6. "NMR structure of protein yqbG from Bacillus subtilis reveals a novel alpha-helical protein fold."
    Liu G., Shen Y., Xiao R., Acton T., Ma L.C., Joachimiak A., Montelione G.T., Szyperski T.
    Proteins 62:288-291(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY NMR, SUBUNIT.

Entry informationi

Entry nameiYQBG_BACSU
AccessioniPrimary (citable) accession number: P45923
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: July 7, 2009
Last modified: February 17, 2016
This is version 101 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.