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P45690 (CSOB_HALNC) Reviewed, UniProtKB/Swiss-Prot

Last modified November 13, 2013. Version 53. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Major carboxysome shell protein 1B
Gene names
Name:csoS1B
Ordered Locus Names:Hneap_0914
OrganismHalothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus neapolitanus) [Complete proteome] [HAMAP]
Taxonomic identifier555778 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaChromatialesHalothiobacillaceaeHalothiobacillus

Protein attributes

Sequence length110 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered.

Sequence similarities

Belongs to the bacterial microcompartments protein family.

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 110110Major carboxysome shell protein 1B
PRO_0000201513

Sequences

Sequence LengthMass (Da)Tools
P45690 [UniParc].

Last modified July 15, 1999. Version 3.
Checksum: D302DC82CAFB9CFE

FASTA11011,301
        10         20         30         40         50         60 
MATTHGIALG MIETRGLVPA IEAADAMTKA AEVRLVGRSF VGGGYVTVMV RGETGAVNAA 

        70         80         90        100        110 
VRAGADACER VGDGLVAAHI IARVHSEVEI ILPETPEDSD SAWCIANLNS 

« Hide

References

« Hide 'large scale' references
[1]"Isolation and characterization of a carboxysome shell gene from Thiobacillus neapolitanus."
English R.S., Lorbach S.C., Qin X., Shively J.M.
Mol. Microbiol. 12:647-654(1994) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]"Insertion mutation of the form I cbbL gene encoding ribulose bisphosphate carboxylase/oxygenase (RuBisCO) in Thiobacillus neapolitanus results in expression of form II RuBisCO, loss of carboxysomes, and an increased CO2 requirement for growth."
Baker S.H., Jin S., Aldrich H.C., Howard G.T., Shively J.M.
J. Bacteriol. 180:4133-4139(1998) [PubMed] [Europe PMC] [Abstract]
Cited for: SEQUENCE REVISION TO 2.
[3]"Complete sequence of Halothiobacillus neapolitanus c2."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Davenport K., Brettin T., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. expand/collapse author list , Kerfeld C., Cannon G., Heinhort S.
Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 23641 / c2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF038430 Genomic DNA. Translation: AAC32557.1.
CP001801 Genomic DNA. Translation: ACX95757.1.
PIRS49416.
RefSeqYP_003262804.1. NC_013422.1.

3D structure databases

ProteinModelPortalP45690.
SMRP45690. Positions 6-97.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING555778.Hneap_0914.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACX95757; ACX95757; Hneap_0914.
GeneID8534055.
KEGGhna:Hneap_0914.
PATRIC32205702. VBIHalNea120669_0933.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG4577.
HOGENOMHOG000286836.
OMACASARQI.
OrthoDBEOG6ZH2H4.

Enzyme and pathway databases

BioCycHNEA555778:GIVV-943-MONOMER.

Family and domain databases

InterProIPR020808. Bact_microcomp_CS.
IPR000249. Microcompartment_bac.
[Graphical view]
PfamPF00936. BMC. 1 hit.
[Graphical view]
SMARTSM00877. BMC. 1 hit.
[Graphical view]
PROSITEPS01139. BACT_MICROCOMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameCSOB_HALNC
AccessionPrimary (citable) accession number: P45690
Secondary accession number(s): D0KZ84
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: July 15, 1999
Last modified: November 13, 2013
This is version 53 of the entry and version 3 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families