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Protein

Major carboxysome shell protein 1B

Gene

csoS1B

Organism
Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus neapolitanus)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered.

Enzyme and pathway databases

BioCyciHNEA555778:GIVV-943-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Major carboxysome shell protein 1B
Gene namesi
Name:csoS1B
Ordered Locus Names:Hneap_0914
OrganismiHalothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus neapolitanus)
Taxonomic identifieri555778 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaChromatialesHalothiobacillaceaeHalothiobacillus
ProteomesiUP000009102 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 110110Major carboxysome shell protein 1BPRO_0000201513Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi555778.Hneap_0914.

Structurei

3D structure databases

ProteinModelPortaliP45690.
SMRiP45690. Positions 6-97.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG4577.
HOGENOMiHOG000286836.
OMAiCASARQI.
OrthoDBiEOG6ZH2H4.

Family and domain databases

InterProiIPR020808. Bact_microcomp_CS.
IPR000249. Microcompartment_bac.
[Graphical view]
PfamiPF00936. BMC. 1 hit.
[Graphical view]
SMARTiSM00877. BMC. 1 hit.
[Graphical view]
PROSITEiPS01139. BACT_MICROCOMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P45690-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATTHGIALG MIETRGLVPA IEAADAMTKA AEVRLVGRSF VGGGYVTVMV
60 70 80 90 100
RGETGAVNAA VRAGADACER VGDGLVAAHI IARVHSEVEI ILPETPEDSD
110
SAWCIANLNS
Length:110
Mass (Da):11,301
Last modified:July 14, 1999 - v3
Checksum:iD302DC82CAFB9CFE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF038430 Genomic DNA. Translation: AAC32557.1.
CP001801 Genomic DNA. Translation: ACX95757.1.
PIRiS49416.
RefSeqiWP_012823793.1. NC_013422.1.
YP_003262804.1. NC_013422.1.

Genome annotation databases

EnsemblBacteriaiACX95757; ACX95757; Hneap_0914.
KEGGihna:Hneap_0914.
PATRICi32205702. VBIHalNea120669_0933.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF038430 Genomic DNA. Translation: AAC32557.1.
CP001801 Genomic DNA. Translation: ACX95757.1.
PIRiS49416.
RefSeqiWP_012823793.1. NC_013422.1.
YP_003262804.1. NC_013422.1.

3D structure databases

ProteinModelPortaliP45690.
SMRiP45690. Positions 6-97.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi555778.Hneap_0914.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACX95757; ACX95757; Hneap_0914.
KEGGihna:Hneap_0914.
PATRICi32205702. VBIHalNea120669_0933.

Phylogenomic databases

eggNOGiCOG4577.
HOGENOMiHOG000286836.
OMAiCASARQI.
OrthoDBiEOG6ZH2H4.

Enzyme and pathway databases

BioCyciHNEA555778:GIVV-943-MONOMER.

Family and domain databases

InterProiIPR020808. Bact_microcomp_CS.
IPR000249. Microcompartment_bac.
[Graphical view]
PfamiPF00936. BMC. 1 hit.
[Graphical view]
SMARTiSM00877. BMC. 1 hit.
[Graphical view]
PROSITEiPS01139. BACT_MICROCOMP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Isolation and characterization of a carboxysome shell gene from Thiobacillus neapolitanus."
    English R.S., Lorbach S.C., Qin X., Shively J.M.
    Mol. Microbiol. 12:647-654(1993) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. "Insertion mutation of the form I cbbL gene encoding ribulose bisphosphate carboxylase/oxygenase (RuBisCO) in Thiobacillus neapolitanus results in expression of form II RuBisCO, loss of carboxysomes, and an increased CO2 requirement for growth."
    Baker S.H., Jin S., Aldrich H.C., Howard G.T., Shively J.M.
    J. Bacteriol. 180:4133-4139(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: SEQUENCE REVISION TO 2.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 23641 / c2.

Entry informationi

Entry nameiCSOB_HALNC
AccessioniPrimary (citable) accession number: P45690
Secondary accession number(s): D0KZ84
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 31, 1995
Last sequence update: July 14, 1999
Last modified: March 31, 2015
This is version 58 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.