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Protein

Major carboxysome shell protein 1A

Gene

csoS1A

Organism
Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus neapolitanus)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered.

Enzyme and pathway databases

BioCyciHNEA555778:GIVV-944-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Major carboxysome shell protein 1A
Gene namesi
Name:csoS1A
Ordered Locus Names:Hneap_0915
OrganismiHalothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus neapolitanus)
Taxonomic identifieri555778 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaChromatialesHalothiobacillaceaeHalothiobacillus
ProteomesiUP000009102 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methioninei1 – 11Removed1 Publication
Chaini2 – 9897Major carboxysome shell protein 1APRO_0000201512Add
BLAST

Interactioni

Protein-protein interaction databases

DIPiDIP-29435N.
STRINGi555778.Hneap_0915.

Structurei

Secondary structure

1
98
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi8 – 169Combined sources
Helixi17 – 3014Combined sources
Beta strandi31 – 4212Combined sources
Beta strandi45 – 528Combined sources
Helixi54 – 6815Combined sources
Beta strandi75 – 839Combined sources
Helixi86 – 894Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2EWHX-ray1.40A1-98[»]
2G13X-ray1.61A1-98[»]
SMRiP45689. Positions 4-98.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP45689.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG4577.
HOGENOMiHOG000286836.
OMAiSWHIIAR.
OrthoDBiEOG6ZH2H4.

Family and domain databases

InterProiIPR020808. Bact_microcomp_CS.
IPR000249. Microcompartment_bac.
[Graphical view]
PfamiPF00936. BMC. 1 hit.
[Graphical view]
SMARTiSM00877. BMC. 1 hit.
[Graphical view]
PROSITEiPS01139. BACT_MICROCOMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P45689-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADVTGIALG MIETRGLVPA IEAADAMTKA AEVRLVGRQF VGGGYVTVLV
60 70 80 90
RGETGAVNAA VRAGADACER VGDGLVAAHI IARVHSEVEN ILPKAPQA
Length:98
Mass (Da):9,963
Last modified:January 23, 2007 - v2
Checksum:iF16D0BDF1AB1EACD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF038430 Genomic DNA. Translation: AAC32556.1.
CP001801 Genomic DNA. Translation: ACX95758.1.
PIRiS49415.
RefSeqiWP_012823794.1. NC_013422.1.
YP_003262805.1. NC_013422.1.

Genome annotation databases

EnsemblBacteriaiACX95758; ACX95758; Hneap_0915.
KEGGihna:Hneap_0915.
PATRICi32205704. VBIHalNea120669_0934.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF038430 Genomic DNA. Translation: AAC32556.1.
CP001801 Genomic DNA. Translation: ACX95758.1.
PIRiS49415.
RefSeqiWP_012823794.1. NC_013422.1.
YP_003262805.1. NC_013422.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2EWHX-ray1.40A1-98[»]
2G13X-ray1.61A1-98[»]
SMRiP45689. Positions 4-98.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-29435N.
STRINGi555778.Hneap_0915.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACX95758; ACX95758; Hneap_0915.
KEGGihna:Hneap_0915.
PATRICi32205704. VBIHalNea120669_0934.

Phylogenomic databases

eggNOGiCOG4577.
HOGENOMiHOG000286836.
OMAiSWHIIAR.
OrthoDBiEOG6ZH2H4.

Enzyme and pathway databases

BioCyciHNEA555778:GIVV-944-MONOMER.

Miscellaneous databases

EvolutionaryTraceiP45689.

Family and domain databases

InterProiIPR020808. Bact_microcomp_CS.
IPR000249. Microcompartment_bac.
[Graphical view]
PfamiPF00936. BMC. 1 hit.
[Graphical view]
SMARTiSM00877. BMC. 1 hit.
[Graphical view]
PROSITEiPS01139. BACT_MICROCOMP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Isolation and characterization of a carboxysome shell gene from Thiobacillus neapolitanus."
    English R.S., Lorbach S.C., Qin X., Shively J.M.
    Mol. Microbiol. 12:647-654(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], PROTEIN SEQUENCE OF 2-18.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 23641 / c2.

Entry informationi

Entry nameiCSOA_HALNC
AccessioniPrimary (citable) accession number: P45689
Secondary accession number(s): D0KZ85
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: January 23, 2007
Last modified: April 1, 2015
This is version 72 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.