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P45689 (CSOA_HALNC) Reviewed, UniProtKB/Swiss-Prot

Last modified November 13, 2013. Version 65. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Major carboxysome shell protein 1A
Gene names
Name:csoS1A
Ordered Locus Names:Hneap_0915
OrganismHalothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus neapolitanus) [Complete proteome] [HAMAP]
Taxonomic identifier555778 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaChromatialesHalothiobacillaceaeHalothiobacillus

Protein attributes

Sequence length98 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered.

Sequence similarities

Belongs to the bacterial microcompartments protein family.

Ontologies

Keywords
   Technical term3D-structure
Complete proteome
Direct protein sequencing
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Initiator methionine11Removed Ref.1
Chain2 – 9897Major carboxysome shell protein 1A
PRO_0000201512

Secondary structure

............. 98
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
P45689 [UniParc].

Last modified January 23, 2007. Version 2.
Checksum: F16D0BDF1AB1EACD

FASTA989,963
        10         20         30         40         50         60 
MADVTGIALG MIETRGLVPA IEAADAMTKA AEVRLVGRQF VGGGYVTVLV RGETGAVNAA 

        70         80         90 
VRAGADACER VGDGLVAAHI IARVHSEVEN ILPKAPQA 

« Hide

References

« Hide 'large scale' references
[1]"Isolation and characterization of a carboxysome shell gene from Thiobacillus neapolitanus."
English R.S., Lorbach S.C., Qin X., Shively J.M.
Mol. Microbiol. 12:647-654(1994) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], PROTEIN SEQUENCE OF 2-18.
[2]"Complete sequence of Halothiobacillus neapolitanus c2."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Davenport K., Brettin T., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. expand/collapse author list , Kerfeld C., Cannon G., Heinhort S.
Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 23641 / c2.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF038430 Genomic DNA. Translation: AAC32556.1.
CP001801 Genomic DNA. Translation: ACX95758.1.
PIRS49415.
RefSeqYP_003262805.1. NC_013422.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
2EWHX-ray1.40A2-97[»]
2G13X-ray1.61A2-97[»]
ProteinModelPortalP45689.
SMRP45689. Positions 4-98.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

DIPDIP-29435N.
STRING555778.Hneap_0915.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACX95758; ACX95758; Hneap_0915.
GeneID8534056.
KEGGhna:Hneap_0915.
PATRIC32205704. VBIHalNea120669_0934.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG4577.
HOGENOMHOG000286836.
OMASWHIIAR.
OrthoDBEOG6ZH2H4.
ProtClustDBCLSK2823142.

Enzyme and pathway databases

BioCycHNEA555778:GIVV-944-MONOMER.

Family and domain databases

InterProIPR020808. Bact_microcomp_CS.
IPR000249. Microcompartment_bac.
[Graphical view]
PfamPF00936. BMC. 1 hit.
[Graphical view]
SMARTSM00877. BMC. 1 hit.
[Graphical view]
PROSITEPS01139. BACT_MICROCOMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

EvolutionaryTraceP45689.

Entry information

Entry nameCSOA_HALNC
AccessionPrimary (citable) accession number: P45689
Secondary accession number(s): D0KZ85
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: January 23, 2007
Last modified: November 13, 2013
This is version 65 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PDB cross-references

Index of Protein Data Bank (PDB) cross-references