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Protein

Major carboxysome shell protein 1C

Gene

csoS1C

Organism
Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus neapolitanus)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered.

Enzyme and pathway databases

BioCyciHNEA555778:GIVV-945-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Major carboxysome shell protein 1C
Gene namesi
Name:csoS1C
Ordered Locus Names:Hneap_0916
OrganismiHalothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus neapolitanus)
Taxonomic identifieri555778 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaChromatialesHalothiobacillaceaeHalothiobacillus
ProteomesiUP000009102 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 9898Major carboxysome shell protein 1CPRO_0000201514Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi555778.Hneap_0916.

Structurei

Secondary structure

1
98
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi8 – 169Combined sources
Helixi17 – 3014Combined sources
Beta strandi34 – 407Combined sources
Beta strandi45 – 528Combined sources
Helixi54 – 6815Combined sources
Beta strandi75 – 839Combined sources
Helixi86 – 894Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3H8YX-ray2.51A1-98[»]
ProteinModelPortaliP45688.
SMRiP45688. Positions 4-98.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP45688.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

HOGENOMiHOG000286836.
OMAiPHSEVEL.
OrthoDBiEOG6ZH2H4.

Family and domain databases

InterProiIPR020808. Bact_microcomp_CS.
IPR000249. Microcompartment_bac.
[Graphical view]
PfamiPF00936. BMC. 1 hit.
[Graphical view]
SMARTiSM00877. BMC. 1 hit.
[Graphical view]
PROSITEiPS01139. BACT_MICROCOMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P45688-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAAVTGIALG MIETRGLVPA IEAADAMTKA AEVRLVGRQF VGGGYVTVLV
60 70 80 90
RGETGAVNAA VRAGADACER VGDGLVAAHI IARVHSEVEN ILPKAPEA
Length:98
Mass (Da):9,919
Last modified:November 1, 1995 - v1
Checksum:i8107CCAF6DB19AC8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF038430 Genomic DNA. Translation: AAC32555.1.
CP001801 Genomic DNA. Translation: ACX95759.1.
PIRiS49414.
RefSeqiWP_012823795.1. NC_013422.1.

Genome annotation databases

EnsemblBacteriaiACX95759; ACX95759; Hneap_0916.
KEGGihna:Hneap_0916.
PATRICi32205706. VBIHalNea120669_0935.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF038430 Genomic DNA. Translation: AAC32555.1.
CP001801 Genomic DNA. Translation: ACX95759.1.
PIRiS49414.
RefSeqiWP_012823795.1. NC_013422.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3H8YX-ray2.51A1-98[»]
ProteinModelPortaliP45688.
SMRiP45688. Positions 4-98.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi555778.Hneap_0916.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACX95759; ACX95759; Hneap_0916.
KEGGihna:Hneap_0916.
PATRICi32205706. VBIHalNea120669_0935.

Phylogenomic databases

HOGENOMiHOG000286836.
OMAiPHSEVEL.
OrthoDBiEOG6ZH2H4.

Enzyme and pathway databases

BioCyciHNEA555778:GIVV-945-MONOMER.

Miscellaneous databases

EvolutionaryTraceiP45688.

Family and domain databases

InterProiIPR020808. Bact_microcomp_CS.
IPR000249. Microcompartment_bac.
[Graphical view]
PfamiPF00936. BMC. 1 hit.
[Graphical view]
SMARTiSM00877. BMC. 1 hit.
[Graphical view]
PROSITEiPS01139. BACT_MICROCOMP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Isolation and characterization of a carboxysome shell gene from Thiobacillus neapolitanus."
    English R.S., Lorbach S.C., Qin X., Shively J.M.
    Mol. Microbiol. 12:647-654(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 23641 / c2.

Entry informationi

Entry nameiCSOC_HALNC
AccessioniPrimary (citable) accession number: P45688
Secondary accession number(s): D0KZ86
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: November 1, 1995
Last modified: July 22, 2015
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.