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Protein

Uncharacterized protein YfeN

Gene

yfeN

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G7256-MONOMER.
ECOL316407:JW2399-MONOMER.

Protein family/group databases

TCDBi1.B.10.3.1. the nucleoside-specific channel-forming outer membrane porin (tsx) family.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YfeN
Gene namesi
Name:yfeN
Ordered Locus Names:b2408, JW2399
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13160. yfeN.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 254254Uncharacterized protein YfeNPRO_0000169224Add
BLAST

Proteomic databases

PaxDbiP45564.

Interactioni

Protein-protein interaction databases

BioGridi4260566. 128 interactions.
STRINGi511145.b2408.

Structurei

3D structure databases

ProteinModelPortaliP45564.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

To V.parahaemolyticus OmpK.Curated

Phylogenomic databases

eggNOGiENOG4108NFH. Bacteria.
ENOG410Y3BS. LUCA.
HOGENOMiHOG000116701.
OMAiWGELYGF.

Family and domain databases

InterProiIPR018013. Channel_Tsx-like.
[Graphical view]
PfamiPF03502. Channel_Tsx. 1 hit.
[Graphical view]
SUPFAMiSSF111364. SSF111364. 1 hit.

Sequencei

Sequence statusi: Complete.

P45564-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKHLLTLTL SSILAIPVVS HAEFKGGFAD IGVHYLDWTS RTTEKSSTKS
60 70 80 90 100
HKDDFGYLEF EGGANFSWGE MYGFFDWENF YNGRHNKPGS EQRYTFKNTN
110 120 130 140 150
RIYLGDTGFN LYLHAYGTYG SANRVNFHDD MFLYGIGYNF TGSGWWFKPF
160 170 180 190 200
FAKRYTDQTY YTGDNGYVAG WVAGYNFMLG SEKFTLTNWN EYEFDRDATY
210 220 230 240 250
AAGNGGKEGL NGAVALWWNA TSHITTGIQY RYADDKLGED FYQDAIIYSI

KFNF
Length:254
Mass (Da):29,233
Last modified:November 1, 1995 - v1
Checksum:iAE5638C5956967D2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X73828 Genomic DNA. Translation: CAA52046.1.
U00096 Genomic DNA. Translation: AAC75461.1.
AP009048 Genomic DNA. Translation: BAA16279.1.
PIRiG65014.
RefSeqiNP_416903.1. NC_000913.3.
WP_000716421.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC75461; AAC75461; b2408.
BAA16279; BAA16279; BAA16279.
GeneIDi946872.
KEGGiecj:JW2399.
eco:b2408.
PATRICi32120197. VBIEscCol129921_2501.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X73828 Genomic DNA. Translation: CAA52046.1.
U00096 Genomic DNA. Translation: AAC75461.1.
AP009048 Genomic DNA. Translation: BAA16279.1.
PIRiG65014.
RefSeqiNP_416903.1. NC_000913.3.
WP_000716421.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP45564.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4260566. 128 interactions.
STRINGi511145.b2408.

Protein family/group databases

TCDBi1.B.10.3.1. the nucleoside-specific channel-forming outer membrane porin (tsx) family.

Proteomic databases

PaxDbiP45564.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC75461; AAC75461; b2408.
BAA16279; BAA16279; BAA16279.
GeneIDi946872.
KEGGiecj:JW2399.
eco:b2408.
PATRICi32120197. VBIEscCol129921_2501.

Organism-specific databases

EchoBASEiEB2952.
EcoGeneiEG13160. yfeN.

Phylogenomic databases

eggNOGiENOG4108NFH. Bacteria.
ENOG410Y3BS. LUCA.
HOGENOMiHOG000116701.
OMAiWGELYGF.

Enzyme and pathway databases

BioCyciEcoCyc:G7256-MONOMER.
ECOL316407:JW2399-MONOMER.

Miscellaneous databases

PROiP45564.

Family and domain databases

InterProiIPR018013. Channel_Tsx-like.
[Graphical view]
PfamiPF03502. Channel_Tsx. 1 hit.
[Graphical view]
SUPFAMiSSF111364. SSF111364. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiYFEN_ECOLI
AccessioniPrimary (citable) accession number: P45564
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: November 1, 1995
Last modified: September 7, 2016
This is version 92 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.