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Protein

Uncharacterized protein YhfY

Gene

yhfY

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:G7734-MONOMER.
ECOL316407:JW5696-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YhfY
Gene namesi
Name:yhfY
Ordered Locus Names:b3382, JW5696
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12920. yhfY.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 120120Uncharacterized protein YhfYPRO_0000169534Add
BLAST

Proteomic databases

PaxDbiP45551.
PRIDEiP45551.

Interactioni

Protein-protein interaction databases

BioGridi4261372. 208 interactions.
STRINGi511145.b3382.

Structurei

3D structure databases

ProteinModelPortaliP45551.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini13 – 119107PRDPROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 PRD domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiENOG4105RMW. Bacteria.
ENOG4111VUY. LUCA.
HOGENOMiHOG000125486.
OMAiENIWLIP.
OrthoDBiEOG6DVJW5.

Family and domain databases

Gene3Di1.10.1790.10. 1 hit.
InterProiIPR011608. PRD.
[Graphical view]
SUPFAMiSSF63520. SSF63520. 1 hit.
PROSITEiPS51372. PRD_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P45551-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
METRLNLLCE AGVIDKDICK GMMQVVNVLE TECHLPVRSE QGTMAMTHMA
60 70 80 90 100
SALMRSRRGE EIEPLDNELL AELAQSSHWQ AVVQLHQVLL KEFALEVNPC
110 120
EEGYLLANLY GLWMAANEEV
Length:120
Mass (Da):13,528
Last modified:December 15, 1998 - v2
Checksum:iA3FFB6494C17202C
GO

Sequence cautioni

The sequence AAA58179.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U18997 Genomic DNA. Translation: AAA58179.1. Different initiation.
U00096 Genomic DNA. Translation: AAC76407.2.
AP009048 Genomic DNA. Translation: BAE77909.1.
PIRiA65133.
RefSeqiNP_417841.2. NC_000913.3.
WP_001295165.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC76407; AAC76407; b3382.
BAE77909; BAE77909; BAE77909.
GeneIDi947888.
KEGGiecj:JW5696.
eco:b3382.
PATRICi32122196. VBIEscCol129921_3475.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U18997 Genomic DNA. Translation: AAA58179.1. Different initiation.
U00096 Genomic DNA. Translation: AAC76407.2.
AP009048 Genomic DNA. Translation: BAE77909.1.
PIRiA65133.
RefSeqiNP_417841.2. NC_000913.3.
WP_001295165.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP45551.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261372. 208 interactions.
STRINGi511145.b3382.

Proteomic databases

PaxDbiP45551.
PRIDEiP45551.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC76407; AAC76407; b3382.
BAE77909; BAE77909; BAE77909.
GeneIDi947888.
KEGGiecj:JW5696.
eco:b3382.
PATRICi32122196. VBIEscCol129921_3475.

Organism-specific databases

EchoBASEiEB2756.
EcoGeneiEG12920. yhfY.

Phylogenomic databases

eggNOGiENOG4105RMW. Bacteria.
ENOG4111VUY. LUCA.
HOGENOMiHOG000125486.
OMAiENIWLIP.
OrthoDBiEOG6DVJW5.

Enzyme and pathway databases

BioCyciEcoCyc:G7734-MONOMER.
ECOL316407:JW5696-MONOMER.

Miscellaneous databases

PROiP45551.

Family and domain databases

Gene3Di1.10.1790.10. 1 hit.
InterProiIPR011608. PRD.
[Graphical view]
SUPFAMiSSF63520. SSF63520. 1 hit.
PROSITEiPS51372. PRD_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYHFY_ECOLI
AccessioniPrimary (citable) accession number: P45551
Secondary accession number(s): Q2M747
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: December 15, 1998
Last modified: April 13, 2016
This is version 95 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.