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Protein

Uncharacterized protein YhfT

Gene

yhfT

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G7729-MONOMER.
ECOL316407:JW3340-MONOMER.

Protein family/group databases

TCDBi9.B.118.1.1. the 11 or 12 tms yhft (yhft) family.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YhfT
Gene namesi
Name:yhfT
Ordered Locus Names:b3377, JW3340
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12915. yhfT.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei50 – 7021HelicalSequence analysisAdd
BLAST
Transmembranei72 – 9221HelicalSequence analysisAdd
BLAST
Transmembranei95 – 11521HelicalSequence analysisAdd
BLAST
Transmembranei135 – 15521HelicalSequence analysisAdd
BLAST
Transmembranei158 – 17821HelicalSequence analysisAdd
BLAST
Transmembranei179 – 19921HelicalSequence analysisAdd
BLAST
Transmembranei229 – 24921HelicalSequence analysisAdd
BLAST
Transmembranei288 – 30821HelicalSequence analysisAdd
BLAST
Transmembranei319 – 33921HelicalSequence analysisAdd
BLAST
Transmembranei376 – 39621HelicalSequence analysisAdd
BLAST
Transmembranei412 – 43221HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 434434Uncharacterized protein YhfTPRO_0000169529Add
BLAST

Proteomic databases

PaxDbiP45546.

Interactioni

Protein-protein interaction databases

BioGridi4263378. 975 interactions.
DIPiDIP-12329N.
IntActiP45546. 1 interaction.
MINTiMINT-1320428.
STRINGi511145.b3377.

Structurei

3D structure databases

ProteinModelPortaliP45546.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4106M0N. Bacteria.
ENOG410XRS1. LUCA.
HOGENOMiHOG000125453.
OMAiMGEHIRT.
OrthoDBiEOG67X1PK.

Family and domain databases

InterProiIPR019733. Uncharacterised_YhfT.
[Graphical view]
PfamiPF10797. YhfT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P45546-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDLYIQIIVV ACLTGMTSLL AHRSAAVFHD GIRPILPQLI EGYMNRREAG
60 70 80 90 100
SIAFGLSIGF VASVGISFTL KTGLLNAWLL FLPTDILGVL AINSLMAFGL
110 120 130 140 150
GAIWGVLILT CLLPVNQLLT ALPVDVLGSL GELSSPVVSA FALFPLVAIF
160 170 180 190 200
YQFGWKQSLI AAVVVLMTRV VVVRYFPHLN PESIEIFIGM VMLLGIAITH
210 220 230 240 250
DLRHRDENDI DASGLSVFEE RTSRIIKNLP YIAIVGALIA AVASMKIFAG
260 270 280 290 300
SEVSIFTLEK AYSAGVTPEQ SQTLINQAAL AEFMRGLGFV PLIATTALAT
310 320 330 340 350
GVYAVAGFTF VYAVDYLSPN PMVAAVLGAV VISAEVLLLR SIGKWLGRYP
360 370 380 390 400
SVRNASDNIR NAMNMLMEVA LLVGSIFAAI KMAGYTGFSI AVAIYFLNES
410 420 430
LGRPVQKMAA PVVAVMITGI LLNVLYWLGL FVPA
Length:434
Mass (Da):46,516
Last modified:July 15, 1998 - v2
Checksum:i8AEE6E009E7A9D14
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U18997 Genomic DNA. Translation: AAA58174.1. Frameshift.
U00096 Genomic DNA. Translation: AAC76402.1.
AP009048 Genomic DNA. Translation: BAE77914.1.
PIRiD65132.
RefSeqiNP_417836.1. NC_000913.3.
WP_000366857.1. NZ_CP014272.1.

Genome annotation databases

EnsemblBacteriaiAAC76402; AAC76402; b3377.
BAE77914; BAE77914; BAE77914.
GeneIDi947883.
KEGGiecj:JW3340.
eco:b3377.
PATRICi32122186. VBIEscCol129921_3470.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U18997 Genomic DNA. Translation: AAA58174.1. Frameshift.
U00096 Genomic DNA. Translation: AAC76402.1.
AP009048 Genomic DNA. Translation: BAE77914.1.
PIRiD65132.
RefSeqiNP_417836.1. NC_000913.3.
WP_000366857.1. NZ_CP014272.1.

3D structure databases

ProteinModelPortaliP45546.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4263378. 975 interactions.
DIPiDIP-12329N.
IntActiP45546. 1 interaction.
MINTiMINT-1320428.
STRINGi511145.b3377.

Protein family/group databases

TCDBi9.B.118.1.1. the 11 or 12 tms yhft (yhft) family.

Proteomic databases

PaxDbiP45546.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC76402; AAC76402; b3377.
BAE77914; BAE77914; BAE77914.
GeneIDi947883.
KEGGiecj:JW3340.
eco:b3377.
PATRICi32122186. VBIEscCol129921_3470.

Organism-specific databases

EchoBASEiEB2751.
EcoGeneiEG12915. yhfT.

Phylogenomic databases

eggNOGiENOG4106M0N. Bacteria.
ENOG410XRS1. LUCA.
HOGENOMiHOG000125453.
OMAiMGEHIRT.
OrthoDBiEOG67X1PK.

Enzyme and pathway databases

BioCyciEcoCyc:G7729-MONOMER.
ECOL316407:JW3340-MONOMER.

Miscellaneous databases

PROiP45546.

Family and domain databases

InterProiIPR019733. Uncharacterised_YhfT.
[Graphical view]
PfamiPF10797. YhfT. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYHFT_ECOLI
AccessioniPrimary (citable) accession number: P45546
Secondary accession number(s): Q2M742
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: July 15, 1998
Last modified: May 11, 2016
This is version 105 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.