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Protein

Uncharacterized protein YhfS

Gene

yhfS

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

BioCyciEcoCyc:G7728-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YhfS
Gene namesi
Name:yhfS
Ordered Locus Names:b3376, JW3339
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12914 yhfS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001695281 – 361Uncharacterized protein YhfSAdd BLAST361

Proteomic databases

PaxDbiP45545
PRIDEiP45545

Interactioni

Protein-protein interaction databases

BioGridi4261269, 140 interactors
DIPiDIP-12328N
IntActiP45545, 5 interactors
STRINGi316385.ECDH10B_3551

Structurei

Secondary structure

1361
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi11 – 28Combined sources18
Helixi31 – 34Combined sources4
Turni44 – 46Combined sources3
Helixi50 – 62Combined sources13
Beta strandi66 – 72Combined sources7
Helixi74 – 86Combined sources13
Beta strandi92 – 98Combined sources7
Helixi102 – 111Combined sources10
Beta strandi114 – 118Combined sources5
Helixi123 – 133Combined sources11
Beta strandi136 – 143Combined sources8
Helixi153 – 162Combined sources10
Beta strandi167 – 170Combined sources4
Turni172 – 177Combined sources6
Helixi182 – 184Combined sources3
Beta strandi188 – 193Combined sources6
Beta strandi203 – 208Combined sources6
Helixi210 – 219Combined sources10
Turni223 – 225Combined sources3
Helixi229 – 261Combined sources33
Beta strandi268 – 288Combined sources21
Helixi290 – 299Combined sources10
Beta strandi303 – 305Combined sources3
Beta strandi307 – 310Combined sources4
Beta strandi318 – 320Combined sources3
Helixi324 – 329Combined sources6
Helixi333 – 335Combined sources3
Beta strandi337 – 341Combined sources5
Helixi347 – 360Combined sources14

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4J8LX-ray1.65A2-361[»]
ProteinModelPortaliP45545
SMRiP45545
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4106PKC Bacteria
ENOG410Z1QN LUCA
HOGENOMiHOG000125442
OMAiRMIRINP

Family and domain databases

Gene3Di3.40.640.10, 1 hit
InterProiView protein in InterPro
IPR004839 Aminotransferase_I/II
IPR015424 PyrdxlP-dep_Trfase
IPR015421 PyrdxlP-dep_Trfase_major
PfamiView protein in Pfam
PF00155 Aminotran_1_2, 1 hit
SUPFAMiSSF53383 SSF53383, 1 hit

Sequencei

Sequence statusi: Complete.

P45545-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKTFPLQSLT IIEAQQKQFA LVDSICRHFP GSEFLTGGDL GLTPGLNQPR
60 70 80 90 100
VTQRVEQVLA DAFHAQAAAL VQGAGTGAIR AGLAALLKPG QRLLVHDAPV
110 120 130 140 150
YPTTRVIIEQ MGLTLITVDF NDLSALKQVV DEQQPDAALV QHTRQQPQDS
160 170 180 190 200
YVLADVLATL RAAGVPALTD DNYAVMKVAR IGCECGANVS TFSCFKLFGP
210 220 230 240 250
EGVGAVVGDA DVINRIRATL YSGGSQIQGA QALEVLRGLV FAPVMHAVQA
260 270 280 290 300
GVSERLLALL NGGAVPEVKS AVIANAQSKV LIVEFHQPIA ARVLEEAQKR
310 320 330 340 350
GALPYPVGAE SKYEIPPLFY RLSGTFRQAN PQSEHCAIRI NPNRSGEETV
360
LRILRESIAS I
Length:361
Mass (Da):38,599
Last modified:November 1, 1995 - v1
Checksum:i53E152242AD1D95E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U18997 Genomic DNA Translation: AAA58173.1
U00096 Genomic DNA Translation: AAC76401.1
AP009048 Genomic DNA Translation: BAE77915.1
PIRiC65132
RefSeqiNP_417835.1, NC_000913.3
WP_000847144.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC76401; AAC76401; b3376
BAE77915; BAE77915; BAE77915
GeneIDi947884
KEGGiecj:JW3339
eco:b3376
PATRICifig|511145.12.peg.3469

Similar proteinsi

Entry informationi

Entry nameiYHFS_ECOLI
AccessioniPrimary (citable) accession number: P45545
Secondary accession number(s): Q2M741
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: November 1, 1995
Last modified: March 28, 2018
This is version 102 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome
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Main funding by: National Institutes of Health