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Protein

UPF0213 protein YhbQ

Gene

yhbQ

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

  • 3'-5'-exodeoxyribonuclease activity Source: EcoCyc
  • endodeoxyribonuclease activity Source: EcoCyc

GO - Biological processi

  • nucleic acid phosphodiester bond hydrolysis Source: EcoCyc

Enzyme and pathway databases

BioCyciEcoCyc:G7649-MONOMER
MetaCyc:G7649-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0213 protein YhbQUniRule annotation
Gene namesi
Name:yhbQUniRule annotation
Ordered Locus Names:b3155, JW3124
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12786 yhbQ

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001613581 – 100UPF0213 protein YhbQAdd BLAST100

Proteomic databases

PaxDbiP45472
PRIDEiP45472

Interactioni

Protein-protein interaction databases

BioGridi4259272, 86 interactors
IntActiP45472, 13 interactors

Structurei

3D structure databases

ProteinModelPortaliP45472
SMRiP45472
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini2 – 77GIY-YIGUniRule annotationAdd BLAST76

Sequence similaritiesi

Belongs to the UPF0213 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG41082IR Bacteria
COG2827 LUCA
HOGENOMiHOG000285485
InParanoidiP45472
KOiK07461
OMAiRLYTGIT
PhylomeDBiP45472

Family and domain databases

Gene3Di3.40.1440.10, 1 hit
HAMAPiMF_01029 UPF0213, 1 hit
InterProiView protein in InterPro
IPR000305 GIY-YIG_endonuc
IPR035901 GIY-YIG_endonuc_sf
IPR022992 UPF0213_GIY-YIG_endonuc
PfamiView protein in Pfam
PF01541 GIY-YIG, 1 hit
SMARTiView protein in SMART
SM00465 GIYc, 1 hit
SUPFAMiSSF82771 SSF82771, 1 hit
PROSITEiView protein in PROSITE
PS50164 GIY_YIG, 1 hit

Sequencei

Sequence statusi: Complete.

P45472-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTPWFLYLIR TADNKLYTGI TTDVERRYQQ HQSGKGAKAL RGKGELTLVF
60 70 80 90 100
SAPVGDRSLA LRAEYRVKQL TKRQKERLVA EGAGFAELLS SLQTPEIKSD
Length:100
Mass (Da):11,270
Last modified:November 1, 1995 - v1
Checksum:i21BA0C8F84A822EC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U18997 Genomic DNA Translation: AAA57958.1
U00096 Genomic DNA Translation: AAC76189.1
AP009048 Genomic DNA Translation: BAE77201.1
PIRiG65105
RefSeqiNP_417624.1, NC_000913.3
WP_000189333.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC76189; AAC76189; b3155
BAE77201; BAE77201; BAE77201
GeneIDi947671
KEGGiecj:JW3124
eco:b3155
PATRICifig|511145.12.peg.3250

Similar proteinsi

Entry informationi

Entry nameiYHBQ_ECOLI
AccessioniPrimary (citable) accession number: P45472
Secondary accession number(s): Q2M955
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: November 1, 1995
Last modified: March 28, 2018
This is version 118 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health