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Protein

UPF0718 protein YraQ

Gene

yraQ

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G7645-MONOMER.
ECOL316407:JW3120-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0718 protein YraQ
Gene namesi
Name:yraQ
Ordered Locus Names:b3151, JW3120
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12782. yraQ.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei12 – 3221HelicalSequence analysisAdd
BLAST
Transmembranei71 – 9121HelicalSequence analysisAdd
BLAST
Transmembranei113 – 13321HelicalSequence analysisAdd
BLAST
Transmembranei146 – 16621HelicalSequence analysisAdd
BLAST
Transmembranei167 – 18721HelicalSequence analysisAdd
BLAST
Transmembranei223 – 24321HelicalSequence analysisAdd
BLAST
Transmembranei260 – 28021HelicalSequence analysisAdd
BLAST
Transmembranei296 – 31621HelicalSequence analysisAdd
BLAST
Transmembranei326 – 34621HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 346346UPF0718 protein YraQPRO_0000169454Add
BLAST

Proteomic databases

PaxDbiP45468.

Interactioni

Protein-protein interaction databases

BioGridi4259268. 4 interactions.
DIPiDIP-12901N.
IntActiP45468. 1 interaction.
MINTiMINT-1279227.
STRINGi511145.b3151.

Structurei

3D structure databases

ProteinModelPortaliP45468.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0718 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4107S21. Bacteria.
COG0701. LUCA.
HOGENOMiHOG000260012.
InParanoidiP45468.
KOiK07089.
OMAiRVWLYIL.
OrthoDBiEOG6HF5W1.
PhylomeDBiP45468.

Family and domain databases

InterProiIPR005524. DUF318.
[Graphical view]
PfamiPF03773. ArsP_1. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P45468-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTGQSSSQAA TPIQWWKPAL FFLVVIAGLW YVKWEPYYGK AFTAAETHSI
60 70 80 90 100
GKSILAQADA NPWQAALDYA MIYFLAVWKA AVLGVILGSL IQVLIPRDWL
110 120 130 140 150
LRTLGQSRFR GTLLGTLFSL PGMMCTCCAA PVAAGMRRQQ VSMGGALAFW
160 170 180 190 200
MGNPVLNPAT LVFMGFVLGW GFAAIRLVAG LVMVLLIATL VQKWVRETPQ
210 220 230 240 250
TQAPVEIDIP EAQGGFFSRW GRALWTLFWS TIPVYILAVL VLGAARVWLF
260 270 280 290 300
PHADGAVDNS LMWVVAMAVA GCLFVIPTAA EIPIVQTMML AGMGTAPALA
310 320 330 340
LLMTLPAVSL PSLIMLRKAF PAKALWLTGA MVAVSGVIVG GLALLF
Length:346
Mass (Da):37,257
Last modified:November 1, 1995 - v1
Checksum:iE101740DDB0CAD1B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U18997 Genomic DNA. Translation: AAA57954.1.
U00096 Genomic DNA. Translation: AAC76185.1.
AP009048 Genomic DNA. Translation: BAE77197.1.
PIRiC65105.
RefSeqiNP_417620.1. NC_000913.3.
WP_000147574.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC76185; AAC76185; b3151.
BAE77197; BAE77197; BAE77197.
GeneIDi947668.
KEGGiecj:JW3120.
eco:b3151.
PATRICi32121720. VBIEscCol129921_3246.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U18997 Genomic DNA. Translation: AAA57954.1.
U00096 Genomic DNA. Translation: AAC76185.1.
AP009048 Genomic DNA. Translation: BAE77197.1.
PIRiC65105.
RefSeqiNP_417620.1. NC_000913.3.
WP_000147574.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP45468.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4259268. 4 interactions.
DIPiDIP-12901N.
IntActiP45468. 1 interaction.
MINTiMINT-1279227.
STRINGi511145.b3151.

Proteomic databases

PaxDbiP45468.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC76185; AAC76185; b3151.
BAE77197; BAE77197; BAE77197.
GeneIDi947668.
KEGGiecj:JW3120.
eco:b3151.
PATRICi32121720. VBIEscCol129921_3246.

Organism-specific databases

EchoBASEiEB2635.
EcoGeneiEG12782. yraQ.

Phylogenomic databases

eggNOGiENOG4107S21. Bacteria.
COG0701. LUCA.
HOGENOMiHOG000260012.
InParanoidiP45468.
KOiK07089.
OMAiRVWLYIL.
OrthoDBiEOG6HF5W1.
PhylomeDBiP45468.

Enzyme and pathway databases

BioCyciEcoCyc:G7645-MONOMER.
ECOL316407:JW3120-MONOMER.

Miscellaneous databases

PROiP45468.

Family and domain databases

InterProiIPR005524. DUF318.
[Graphical view]
PfamiPF03773. ArsP_1. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYRAQ_ECOLI
AccessioniPrimary (citable) accession number: P45468
Secondary accession number(s): Q2M959
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: November 1, 1995
Last modified: January 20, 2016
This is version 101 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.