P45422 (YHCF_ECOLI) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Uncharacterized protein YhcF

Gene names

Name:	yhcF
Ordered Locus Names:	b3219, JW3188

Organism

Escherichia coli (strain K12) [Reference proteome] [HAMAP]

Taxonomic identifier

83333 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia › Escherichia coli

Protein attributes

Sequence length	238 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

To E.coli GltF.

Ontologies

Keywords
Domain	Signal
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	response to DNA damage stimulus Inferred from expression pattern PubMed 11967071. Source: EcoliWiki
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 20	20	Potential
	Chain	21 – 238	218	Uncharacterized protein YhcF		PRO_0000013920

Sequences

	Sequence		Length	Mass (Da)
	P45422 [UniParc]. Last modified November 1, 1995. Version 1. Checksum: 5E7EE24AE6CCACE4	FASTA	238	24,900
	10 20 30 40 50 60 MNNVKLLIAG SAFFAMSAQA ADRVSIDVKV TLEAAACTPI LSNGGVVNFG SHSVNRLSTQ 70 80 90 100 110 120 HYTQIGTRNI NMTITCESAT GIAITARDTR MDSMTTGKDS GGQSGVKYTL NGGGYISQTT 130 140 150 160 170 180 RLFGLGKTKD NKNIGSYAVL IDSNNISASN GSQTLAVSIA GADAVITGQK RAWQTLTAYP 190 200 210 220 230 LAVDQSYYYT FVKPGETTPT PVTNAIIPLQ VSASIANDLG GSEKIELDGK AVISVVYL

References

[1]	"The complete genome sequence of Escherichia coli K-12." Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y. Science 277:1453-1474(1997) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / MG1655 / ATCC 47076.
[2]	"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110." Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T. Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	U18997 Genomic DNA. Translation: AAA58021.1. U00096 Genomic DNA. Translation: AAC76251.1. AP009048 Genomic DNA. Translation: BAE77262.1.
PIR	E65113.
RefSeq	NP_417686.1. NC_000913.2. YP_491403.1. NC_007779.1.
3D structure databases
ProteinModelPortal	P45422.
ModBase	Search...
Protein-protein interaction databases
STRING	511145.b3219.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAC76251; AAC76251; b3219. BAE77262; BAE77262; BAE77262.
GeneID	12933063. 947735.
KEGG	ecj:Y75_p3139. eco:b3219.
PATRIC	32121862. VBIEscCol129921_3315.
Organism-specific databases
EchoBASE	EB2663.
EcoGene	EG12812. yhcF.
Phylogenomic databases
eggNOG	NOG125592.
HOGENOM	HOG000260641.
OMA	NVNIGAY.
ProtClustDB	CLSK2301715.
Enzyme and pathway databases
BioCyc	EcoCyc:G7673-MONOMER. ECOL316407:JW3188-MONOMER.
Gene expression databases
Genevestigator	P45422.
Family and domain databases
InterPro	IPR010546. DUF1120. [Graphical view]
Pfam	PF06551. DUF1120. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

YHCF_ECOLI

Accession

Primary (citable) accession number: P45422
Secondary accession number(s): Q2M8Z4

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 1, 1995
Last sequence update:	November 1, 1995
Last modified:	May 1, 2013
This is version 76 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program