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Protein

Probable RNA polymerase sigma factor HI_1459

Gene

HI_1459

Organism
Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi161 – 180H-T-H motifBy similarityAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding, Sigma factor
Biological processTranscription, Transcription regulation

Names & Taxonomyi

Protein namesi
Recommended name:
Probable RNA polymerase sigma factor HI_1459
Gene namesi
Ordered Locus Names:HI_1459
OrganismiHaemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Taxonomic identifieri71421 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeHaemophilus
Proteomesi
  • UP000000579 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000940201 – 194Probable RNA polymerase sigma factor HI_1459Add BLAST194

Interactioni

Protein-protein interaction databases

STRINGi71421.HI1459

Structurei

3D structure databases

ProteinModelPortaliP45215
SMRiP45215
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi45 – 58Polymerase core bindingAdd BLAST14

Sequence similaritiesi

Belongs to the sigma-70 factor family. ECF subfamily.Curated

Phylogenomic databases

eggNOGiENOG4108WQI Bacteria
COG1595 LUCA
KOiK03088
OMAiFMMREWL

Family and domain databases

Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR014289 RNA_pol_sigma-24-rel
IPR014284 RNA_pol_sigma-70_dom
IPR000838 RNA_pol_sigma70_ECF_CS
IPR007627 RNA_pol_sigma70_r2
IPR013249 RNA_pol_sigma70_r4_t2
IPR013325 RNA_pol_sigma_r2
IPR013324 RNA_pol_sigma_r3/r4-like
IPR036388 WH-like_DNA-bd_sf
PfamiView protein in Pfam
PF04542 Sigma70_r2, 1 hit
PF08281 Sigma70_r4_2, 1 hit
SUPFAMiSSF88659 SSF88659, 1 hit
SSF88946 SSF88946, 1 hit
TIGRFAMsiTIGR02943 Sig70_famx1, 1 hit
TIGR02937 sigma70-ECF, 1 hit
PROSITEiView protein in PROSITE
PS01063 SIGMA70_ECF, 1 hit

Sequencei

Sequence statusi: Complete.

P45215-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSFISYISFK GIKMNVISDL ELQQIRTQML TFAQLQVNQA DLAEDLVQEA
60 70 80 90 100
FLSAFKNLAN FKRQSAFKTW IFAILKNKII DYLRQKGRFV LESELEDENT
110 120 130 140 150
NNSFFDEKGH WKPEYHPSEL QGEEETVYSD EFWLIFETCL NCLPAKQAKI
160 170 180 190
FMMREFLELS SEEICQETHL TSSNLHTTLY RARLQLQNCL SKKL
Length:194
Mass (Da):22,843
Last modified:November 1, 1995 - v1
Checksum:i9E55F57235B43CE1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L42023 Genomic DNA Translation: AAC23107.1
PIRiG64124
RefSeqiNP_439610.2, NC_000907.1

Genome annotation databases

EnsemblBacteriaiAAC23107; AAC23107; HI_1459
GeneIDi950350
KEGGihin:HI1459
PATRICifig|71421.8.peg.1522

Similar proteinsi

Entry informationi

Entry nameiY1459_HAEIN
AccessioniPrimary (citable) accession number: P45215
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: November 1, 1995
Last modified: April 25, 2018
This is version 105 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health