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P45215 (Y1459_HAEIN) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 93. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Probable RNA polymerase sigma factor HI_1459
Gene names
Ordered Locus Names:HI_1459
OrganismHaemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) [Reference proteome] [HAMAP]
Taxonomic identifier71421 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeHaemophilus

Protein attributes

Sequence length194 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the sigma-70 factor family. ECF subfamily.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 194194Probable RNA polymerase sigma factor HI_1459
PRO_0000094020

Regions

DNA binding161 – 18020H-T-H motif By similarity
Motif45 – 5814Polymerase core binding

Sequences

Sequence LengthMass (Da)Tools
P45215 [UniParc].

Last modified November 1, 1995. Version 1.
Checksum: 9E55F57235B43CE1

FASTA19422,843
        10         20         30         40         50         60 
MSFISYISFK GIKMNVISDL ELQQIRTQML TFAQLQVNQA DLAEDLVQEA FLSAFKNLAN 

        70         80         90        100        110        120 
FKRQSAFKTW IFAILKNKII DYLRQKGRFV LESELEDENT NNSFFDEKGH WKPEYHPSEL 

       130        140        150        160        170        180 
QGEEETVYSD EFWLIFETCL NCLPAKQAKI FMMREFLELS SEEICQETHL TSSNLHTTLY 

       190 
RARLQLQNCL SKKL 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
L42023 Genomic DNA. Translation: AAC23107.1.
PIRG64124.
RefSeqNP_439610.2. NC_000907.1.

3D structure databases

ProteinModelPortalP45215.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING71421.HI1459.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAC23107; AAC23107; HI_1459.
GeneID950350.
KEGGhin:HI1459.
PATRIC20191625. VBIHaeInf48452_1522.

Phylogenomic databases

eggNOGCOG1595.
KOK03088.
OMAFMMREWL.
OrthoDBEOG6F299N.
ProtClustDBPRK12530.

Family and domain databases

Gene3D1.10.10.10. 1 hit.
InterProIPR014289. RNA_pol_sigma-24-rel.
IPR014284. RNA_pol_sigma-70_dom.
IPR000838. RNA_pol_sigma70_ECF_CS.
IPR007627. RNA_pol_sigma70_r2.
IPR013249. RNA_pol_sigma70_r4_t2.
IPR013325. RNA_pol_sigma_r2.
IPR013324. RNA_pol_sigma_r3_r4.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamPF04542. Sigma70_r2. 1 hit.
PF08281. Sigma70_r4_2. 1 hit.
[Graphical view]
SUPFAMSSF88659. SSF88659. 1 hit.
SSF88946. SSF88946. 1 hit.
TIGRFAMsTIGR02943. Sig70_famx1. 1 hit.
TIGR02937. sigma70-ECF. 1 hit.
PROSITEPS01063. SIGMA70_ECF. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameY1459_HAEIN
AccessionPrimary (citable) accession number: P45215
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: November 1, 1995
Last modified: February 19, 2014
This is version 93 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Haemophilus influenzae

Haemophilus influenzae (strain Rd): entries and gene names