Reviewed,
UniProtKB/Swiss-Prot P45204 (ISPA_HAEIN)
Last modified
November 3, 2009.
Version 59.
History...
Clusters with 100%,
90%,
50% identity |
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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents
Names and origin
| Protein names | Recommended name: Geranyltranstransferase EC=2.5.1.10 Alternative name(s): Farnesyl-diphosphate synthase Short name=FPP synthase | ||||
| Gene names |
| ||||
| Organism | Haemophilus influenzae [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 727 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Proteobacteria › Gammaproteobacteria › Pasteurellales › Pasteurellaceae › Haemophilus |
Protein attributes
| Sequence length | 295 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Inferred from homology. |
General annotation (Comments)
| Catalytic activity | Geranyl diphosphate + isopentenyl diphosphate = diphosphate + trans,trans-farnesyl diphosphate. |
| Cofactor | Binds 3 magnesium ions per subunit By similarity. |
| Subcellular location | |
| Sequence similarities | Belongs to the FPP/GGPP synthetase family. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Isoprene biosynthesis |
| Cellular component | Cytoplasm |
| Ligand | Magnesium Metal-binding |
| Molecular function | Transferase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | isoprenoid biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW |
| Cellular component | cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular function | geranyltranstransferase activity Inferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 295 | 295 | Geranyltranstransferase | PRO_0000123983 | |||||
Sites | |||||||||
| Metal binding | 85 | 1 | Magnesium 1 By similarity | ||||||
| Metal binding | 85 | 1 | Magnesium 2 By similarity | ||||||
| Metal binding | 91 | 1 | Magnesium 1 By similarity | ||||||
| Metal binding | 91 | 1 | Magnesium 2 By similarity | ||||||
| Metal binding | 223 | 1 | Magnesium 3 By similarity | ||||||
| Binding site | 46 | 1 | Isopentenyl diphosphate By similarity | ||||||
| Binding site | 49 | 1 | Isopentenyl diphosphate By similarity | ||||||
| Binding site | 78 | 1 | Isopentenyl diphosphate By similarity | ||||||
| Binding site | 96 | 1 | Geranyl diphosphate By similarity | ||||||
| Binding site | 97 | 1 | Isopentenyl diphosphate By similarity | ||||||
| Binding site | 180 | 1 | Geranyl diphosphate By similarity | ||||||
| Binding site | 181 | 1 | Geranyl diphosphate By similarity | ||||||
| Binding site | 220 | 1 | Geranyl diphosphate By similarity | ||||||
| Binding site | 237 | 1 | Geranyl diphosphate By similarity | ||||||
Sequences
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References
| [1] | "Whole-genome random sequencing and assembly of Haemophilus influenzae Rd." Fleischmann R.D., Adams M.D., White O., Clayton R.A., Kirkness E.F., Kerlavage A.R., Bult C.J., Tomb J.-F., Dougherty B.A., Merrick J.M., McKenney K., Sutton G.G., FitzHugh W., Fields C.A., Gocayne J.D., Scott J.D., Shirley R., Liu L.-I. Venter J.C.Science 269:496-512(1995) [PubMed: 7542800] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 51907 / DSM 11121 / KW20 / Rd. |
Cross-references
Sequence databases | |
|---|---|
| L42023 Genomic DNA. Translation: AAC23087.1. | |
| PIR | C64123. |
| RefSeq | NP_439590.1. |
3D structure databases | |
| ModBase | Search... |
Genome annotation databases | |
| GeneID | 950833. |
| GenomeReviews | Gene locus HI1438 in contig L42023_GR. |
| KEGG | hin:HI1438. |
| NMPDR | fig|71421.1.peg.1372. |
| TIGR | HI1438. |
Phylogenomic databases | |
| HOGENOM | P45204. |
| OMA | LDCYFEN. |
Enzyme and pathway databases | |
| BioCyc | HINF71421:HI_1438-MON. |
| BRENDA | 2.5.1.10. 109. |
Family and domain databases | |
| InterPro | IPR000092. Polyprenyl_synt. IPR017446. Polyprenyl_synth-rel. IPR008949. Terpenoid_synth. [Graphical view] |
| Gene3D | G3DSA:1.10.600.10. Terpenoid_synth. 1 hit. |
| PANTHER | PTHR12001. Polyprenyl_synt. 1 hit. |
| Pfam | PF00348. polyprenyl_synt. 1 hit. [Graphical view] |
| PROSITE | PS00723. POLYPRENYL_SYNTHET_1. 1 hit. PS00444. POLYPRENYL_SYNTHET_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | ISPA_HAEIN | ||||||||
| Accession | Primary (citable) accession number: P45204 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes) | ||||||||
Relevant documents
| Haemophilus influenzae Haemophilus influenzae (strain Rd): entries and gene names |
| SIMILARITY comments Index of protein domains and families |

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