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P45141 (RBFA_HAEIN) Reviewed, UniProtKB/Swiss-Prot

Last modified May 29, 2013. Version 94. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Ribosome-binding factor A
Gene names
Name:rbfA
Ordered Locus Names:HI_1288
OrganismHaemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) [Reference proteome] [HAMAP]
Taxonomic identifier71421 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Pasteurellales › Pasteurellaceae › Haemophilus ›

Protein attributes

Sequence length128 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Essential for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA By similarity. HAMAP-Rule MF_00003

Subcellular location

Cytoplasm Potential HAMAP-Rule MF_00003.

Sequence similarities

Belongs to the RbfA family.

Ontologies

Keywords
   Biological processrRNA processing
   Cellular componentCytoplasm
   Technical term3D-structure
Complete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processrRNA processing

Inferred from electronic annotation. Source: HAMAP

   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 128128Ribosome-binding factor A HAMAP-Rule MF_00003
PRO_0000102670

Secondary structure

1 ............... 128
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
P45141 [UniParc].

Last modified November 1, 1995. Version 1.
Checksum: 9E274DC1240D64DF

FASTA12814,805
        10         20         30         40         50         60 
MAREFKRSDR VAQEIQKEIA VILQREVKDP RIGMVTVSDV EVSSDLSYAK IFVTFLFDHD 

        70         80         90        100        110        120 
EMAIEQGMKG LEKASPYIRS LLGKAMRLRI VPEIRFIYDQ SLVEGMRMSN LVTNVVREDE 


KKHVEESN

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		L42023 Genomic DNA. Translation: AAC22937.1.
PIRA64170.
RefSeqNP_439440.1. NC_000907.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
1JOSX-ray1.70A1-128[»]
ProteinModelPortalP45141.
SMRP45141. Positions 7-106.
ModBaseSearch...

Protein-protein interaction databases

STRING71421.HI1288.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAC22937; AAC22937; HI_1288.
GeneID950218.
KEGGhin:HI1288.
PATRIC20191259. VBIHaeInf48452_1340.

Phylogenomic databases

eggNOGCOG0858.
KOK02834.
OMATRVGEQM.
ProtClustDBPRK00521.

Family and domain databases

Gene3D3.30.300.20. 1 hit.
HAMAPMF_00003. RbfA.
InterProIPR015946. KH_dom-like_a/b.
IPR000238. Ribosome-bd_facA.
IPR023799. Ribosome-bd_facA_dom.
IPR020053. Ribosome-bd_factorA_CS.
[Graphical view]
PfamPF02033. RBFA. 1 hit.
[Graphical view]
ProDomPD007327. Rib_bd_factA. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMSSF89919. Rib_bd_factA. 1 hit.
TIGRFAMsTIGR00082. rbfA. 1 hit.
PROSITEPS01319. RBFA. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

EvolutionaryTraceP45141.

Entry information

Entry nameRBFA_HAEIN
AccessionPrimary (citable) accession number: P45141
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: November 1, 1995
Last modified: May 29, 2013
This is version 94 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Haemophilus influenzae

Haemophilus influenzae (strain Rd): entries and gene names

PDB cross-references

Index of Protein Data Bank (PDB) cross-references

SIMILARITY comments

Index of protein domains and families

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