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Protein

ATP-binding/permease protein CydC

Gene

cydC

Organism
Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Somehow involved in the cytochrome D branch of aerobic respiration. Seems to be a component of a transport system (By similarity).By similarity

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi372 – 379ATPPROSITE-ProRule annotation8

GO - Molecular functioni

Keywordsi

Biological processTransport
LigandATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
ATP-binding/permease protein CydC
Gene namesi
Name:cydC
Ordered Locus Names:HI_1156
OrganismiHaemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Taxonomic identifieri71421 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeHaemophilus
Proteomesi
  • UP000000579 Componenti: Chromosome

Subcellular locationi

P45081:

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei16 – 36HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei38 – 58HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei133 – 153HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei155 – 175HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei244 – 264HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei281 – 301HelicalPROSITE-ProRule annotationAdd BLAST21

GO - Cellular componenti

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000922421 – 576ATP-binding/permease protein CydCAdd BLAST576

Interactioni

Protein-protein interaction databases

STRINGi71421.HI1156.

Structurei

3D structure databases

ProteinModelPortaliP45081.
SMRiP45081.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini18 – 308ABC transmembrane type-1PROSITE-ProRule annotationAdd BLAST291
Domaini338 – 574ABC transporterPROSITE-ProRule annotationAdd BLAST237

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4108JJ8. Bacteria.
COG4987. LUCA.
KOiK16012.
OMAiWGERVVS.
PhylomeDBiP45081.

Family and domain databases

Gene3Di1.20.1560.10. 1 hit.
InterProiView protein in InterPro
IPR003593. AAA+_ATPase.
IPR011527. ABC1_TM_dom.
IPR036640. ABC1_TM_sf.
IPR014223. ABC_CydC.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR027417. P-loop_NTPase.
PfamiView protein in Pfam
PF00664. ABC_membrane. 1 hit.
PF00005. ABC_tran. 1 hit.
SMARTiView protein in SMART
SM00382. AAA. 1 hit.
SUPFAMiSSF52540. SSF52540. 1 hit.
SSF90123. SSF90123. 1 hit.
TIGRFAMsiTIGR02868. CydC. 1 hit.
PROSITEiView protein in PROSITE
PS50929. ABC_TM1F. 1 hit.
PS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 1 hit.

Sequencei

Sequence statusi: Complete.

P45081-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRTLLPFIRL FKFAKFPLIL GLVLMILGLG SSMGLLTVSG WFLAATAIAG
60 70 80 90 100
LGTLFNFFYP SASVRGLAIG RTVMRYFEKI VTHDATFRIL SKLRVQVFEK
110 120 130 140 150
IIPLSPAVLN RYRNSDLLNR LVSDVDTLDS LYLRLLAPFF TAVFVIIAMM
160 170 180 190 200
IGLSFINIPL ALGLGLFLLI LLMIIPTVFY RLGQQFGERL IQARATYRTQ
210 220 230 240 250
FLEFIQAQAE LLLFNAEDKL KEKMLVTEKT WQEDQAKEAK LSGFSTALVL
260 270 280 290 300
FLNGLLISGM LWFASNADFG TDEYHTAYIA LFTFAALAAF EIIMPLGAAF
310 320 330 340 350
LHIGQVIAAA ERVTEIIEQK PLVEFNGNEE FETKVRLISA KNLNFSYPEQ
360 370 380 390 400
ETLVLKNLTL DLEQGKKIAI LGKTGSGKSS LLQLLVRNYD ANQGELLLAE
410 420 430 440 450
KPISAYSEET LRHQICFLTQ RVHVFSDTLR QNLQFASADK ISDEQMIEML
460 470 480 490 500
HQVGLSKLLE QEGKGLNLWL GDGGRPLSGG EQRRLGLARI LLNNASILLL
510 520 530 540 550
DEPTEGLDRE TERQILRLIL QHAENKTLII VTHRLSSIEQ FDKICVIDNG
560 570
RLIEEGDYNS LITKENGFFK RLIERV
Length:576
Mass (Da):64,832
Last modified:November 1, 1995 - v1
Checksum:iA9ACD8B9B294B1B3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L42023 Genomic DNA. Translation: AAC22811.1.
PIRiE64186.
RefSeqiNP_439314.1. NC_000907.1.
WP_005693471.1. NC_000907.1.

Genome annotation databases

EnsemblBacteriaiAAC22811; AAC22811; HI_1156.
GeneIDi949498.
KEGGihin:HI1156.
PATRICifig|71421.8.peg.1207.

Similar proteinsi

Entry informationi

Entry nameiCYDC_HAEIN
AccessioniPrimary (citable) accession number: P45081
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: November 1, 1995
Last modified: October 25, 2017
This is version 118 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Haemophilus influenzae
    Haemophilus influenzae (strain Rd): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families