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Protein

Probable type-2 restriction enzyme HindVP

Gene

hindVRP

Organism
Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

Catalytic activityi

Endonucleolytic cleavage of DNA to give specific double-stranded fragments with terminal 5'-phosphates.

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Endonuclease, Hydrolase, Nuclease

Keywords - Biological processi

Restriction system

Protein family/group databases

REBASEi2819. HindVP.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable type-2 restriction enzyme HindVP (EC:3.1.21.4)
Short name:
R.HindVP
Alternative name(s):
Endonuclease HindVP
Type II restriction enzyme HindVP
Gene namesi
Name:hindVRP
Ordered Locus Names:HI_1040
OrganismiHaemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Taxonomic identifieri71421 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeHaemophilus
ProteomesiUP000000579 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 334334Probable type-2 restriction enzyme HindVPPRO_0000077322Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi71421.HI1040.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG256210.
KOiK01155.
OMAiWGKNQFN.
OrthoDBiEOG6677SG.

Family and domain databases

InterProiIPR019044. Restrct_endonuc_II_HindVP.
[Graphical view]
PfamiPF09519. RE_HindVP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P44999-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLYYVPRREK SYMNIKPHLF GLNRSNRDFS LRETWGKNQF NSSFPVSLCC
60 70 80 90 100
YMSSKGILAN YLSIENAEIK CSSIDIKDVF EIEPENENTF FAFETSHSIK
110 120 130 140 150
LTALPDHTTC DLTDADFGSE IVIRPDSIVY LACSLAEILK ESLANCMDIP
160 170 180 190 200
NNVDHLDWSE PKQVIPLFPH ILSTLNNLCS RADTIQTPFL LQPVWKTLGK
210 220 230 240 250
SPRLADNCLD IFIWSDVAFV KFILEISNLN VNVLSINRQT RTAIWLYKML
260 270 280 290 300
VDIVKYGRFN HHKIIDLCSY NTKNDKAFAS SGMITNVFMK SERLERPIIM
310 320 330
KSEIKNIILG GGQELLSPER RFDAIIYNSS ELFR
Length:334
Mass (Da):38,346
Last modified:November 1, 1995 - v1
Checksum:i8CA1F88E76E730DD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L42023 Genomic DNA. Translation: AAC22699.1.
PIRiB64109.
RefSeqiNP_439199.1. NC_000907.1.
WP_010869112.1. NC_000907.1.

Genome annotation databases

EnsemblBacteriaiAAC22699; AAC22699; HI_1040.
GeneIDi950604.
KEGGihin:HI1040.
PATRICi20190743. VBIHaeInf48452_1084.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L42023 Genomic DNA. Translation: AAC22699.1.
PIRiB64109.
RefSeqiNP_439199.1. NC_000907.1.
WP_010869112.1. NC_000907.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi71421.HI1040.

Protein family/group databases

REBASEi2819. HindVP.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC22699; AAC22699; HI_1040.
GeneIDi950604.
KEGGihin:HI1040.
PATRICi20190743. VBIHaeInf48452_1084.

Phylogenomic databases

eggNOGiNOG256210.
KOiK01155.
OMAiWGKNQFN.
OrthoDBiEOG6677SG.

Family and domain databases

InterProiIPR019044. Restrct_endonuc_II_HindVP.
[Graphical view]
PfamiPF09519. RE_HindVP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 51907 / DSM 11121 / KW20 / Rd.

Entry informationi

Entry nameiT2D5_HAEIN
AccessioniPrimary (citable) accession number: P44999
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: November 1, 1995
Last modified: January 7, 2015
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Haemophilus influenzae
    Haemophilus influenzae (strain Rd): entries and gene names
  2. Restriction enzymes and methylases
    Classification of restriction enzymes and methylases and list of entries

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.