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Protein

UPF0352 protein HI_0840

Gene

HI_0840

Organism
Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0352 protein HI_0840UniRule annotation
Gene namesi
Ordered Locus Names:HI_0840
OrganismiHaemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Taxonomic identifieri71421 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeHaemophilus
Proteomesi
  • UP000000579 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7272UPF0352 protein HI_0840PRO_0000201789Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi71421.HI0840.

Structurei

Secondary structure

1
72
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi9 – 2618Combined sources
Helixi31 – 4515Combined sources
Helixi54 – 7219Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2JUZNMR-A/B1-72[»]
ProteinModelPortaliP44897.
SMRiP44897. Positions 1-72.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP44897.

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0352 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105YDX. Bacteria.
COG3082. LUCA.
KOiK09904.
OMAiHQAPTDL.
OrthoDBiEOG615VPH.
PhylomeDBiP44897.

Family and domain databases

Gene3Di1.10.3390.10. 1 hit.
HAMAPiMF_00816. UPF0352.
InterProiIPR009857. UPF0352.
IPR023202. YejL_dom.
[Graphical view]
PfamiPF07208. DUF1414. 1 hit.
[Graphical view]
PIRSFiPIRSF006188. UCP006188. 1 hit.
ProDomiPD027794. UPF0352. 1 hit.
[Graphical view] [Entries sharing at least one domain]

Sequencei

Sequence statusi: Complete.

P44897-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAQHSKYSDA QLSAIVNDMI AVLEKHKAPV DLSLIALGNM ASNLLTTSVP
60 70
QTQCEALAQA FSNSLINAVK TR
Length:72
Mass (Da):7,684
Last modified:November 1, 1995 - v1
Checksum:i7220CB06FCC35BC2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L42023 Genomic DNA. Translation: AAC22499.1.
PIRiE64159.
RefSeqiNP_439000.1. NC_000907.1.
WP_005693192.1. NC_000907.1.

Genome annotation databases

EnsemblBacteriaiAAC22499; AAC22499; HI_0840.
GeneIDi949854.
KEGGihin:HI0840.
PATRICi20190335. VBIHaeInf48452_0881.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L42023 Genomic DNA. Translation: AAC22499.1.
PIRiE64159.
RefSeqiNP_439000.1. NC_000907.1.
WP_005693192.1. NC_000907.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2JUZNMR-A/B1-72[»]
ProteinModelPortaliP44897.
SMRiP44897. Positions 1-72.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi71421.HI0840.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC22499; AAC22499; HI_0840.
GeneIDi949854.
KEGGihin:HI0840.
PATRICi20190335. VBIHaeInf48452_0881.

Phylogenomic databases

eggNOGiENOG4105YDX. Bacteria.
COG3082. LUCA.
KOiK09904.
OMAiHQAPTDL.
OrthoDBiEOG615VPH.
PhylomeDBiP44897.

Miscellaneous databases

EvolutionaryTraceiP44897.

Family and domain databases

Gene3Di1.10.3390.10. 1 hit.
HAMAPiMF_00816. UPF0352.
InterProiIPR009857. UPF0352.
IPR023202. YejL_dom.
[Graphical view]
PfamiPF07208. DUF1414. 1 hit.
[Graphical view]
PIRSFiPIRSF006188. UCP006188. 1 hit.
ProDomiPD027794. UPF0352. 1 hit.
[Graphical view] [Entries sharing at least one domain]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 51907 / DSM 11121 / KW20 / Rd.

Entry informationi

Entry nameiY840_HAEIN
AccessioniPrimary (citable) accession number: P44897
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: November 1, 1995
Last modified: December 9, 2015
This is version 90 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Haemophilus influenzae
    Haemophilus influenzae (strain Rd): entries and gene names
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families
  4. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.