Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Protein transport protein HofC homolog

Gene

hofC

Organism
Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

  1. protein secretion Source: InterPro
Complete GO annotation...

Keywords - Biological processi

Transport

Names & Taxonomyi

Protein namesi
Recommended name:
Protein transport protein HofC homolog
Gene namesi
Name:hofC
Synonyms:hopC
Ordered Locus Names:HI_0297
OrganismiHaemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Taxonomic identifieri71421 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeHaemophilus
ProteomesiUP000000579 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei167 – 18721HelicalSequence AnalysisAdd
BLAST
Transmembranei214 – 23421HelicalSequence AnalysisAdd
BLAST
Transmembranei379 – 39921HelicalSequence AnalysisAdd
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
  2. plasma membrane Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 406406Protein transport protein HofC homologPRO_0000207846Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi71421.HI0297.

Family & Domainsi

Sequence similaritiesi

Belongs to the GSP F family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiCOG1459.
KOiK02505.
OMAiIKALRYP.
OrthoDBiEOG6Z6FTM.
PhylomeDBiP44621.

Family and domain databases

InterProiIPR003004. GspF/PilC.
IPR018076. T2SS_F.
IPR001992. Type_2_secretion_system_CS.
[Graphical view]
PfamiPF00482. T2SF. 2 hits.
[Graphical view]
PRINTSiPR00812. BCTERIALGSPF.
PROSITEiPS00874. T2SP_F. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P44621-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTKKLFYYQA SNPLNQKQKG SIIADTKQQA HFQLISRGLT HIKLQQNWQF
60 70 80 90 100
GAKPKNSEIS ELLNQLATLL QSAIPLKNSL QILQQNCTQI VLNEWLERLL
110 120 130 140 150
QSIESGLAFS QAIEQQGKYL TQQEIQLIQV GEMTGKLAVV CKKIATHRSQ
160 170 180 190 200
SLALQRKLQK IMLYPSMVLG ISLLLTLALL LFIVPQFAEM YSGNNAELPT
210 220 230 240 250
ITAILLSISN FLKQNIGILL FFVLSFFLFY YFYLKRQTWF YQKKNQLISI
260 270 280 290 300
TPIFGTIQKL SRLVNFSQSL QIMLQAGVPL NQALDSFLPR TQTWQTKKTL
310 320 330 340 350
VNDIVLDKEV RSILQWVSQG YAFSNSVSSD LFPMEAQQML QIGEQSGKLA
360 370 380 390 400
LMLEHIAENY QEKLNHQIDL LSQMLEPLMM VIIGSLIGII MMGMYLPIFN

MGSVIQ
Length:406
Mass (Da):46,291
Last modified:November 1, 1995 - v1
Checksum:i429D83B7C10F8F82
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L42023 Genomic DNA. Translation: AAC21961.1.
PIRiD64060.
RefSeqiNP_438464.1. NC_000907.1.
WP_005694369.1. NC_000907.1.

Genome annotation databases

EnsemblBacteriaiAAC21961; AAC21961; HI_0297.
GeneIDi950200.
KEGGihin:HI0297.
PATRICi20189133. VBIHaeInf48452_0313.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L42023 Genomic DNA. Translation: AAC21961.1.
PIRiD64060.
RefSeqiNP_438464.1. NC_000907.1.
WP_005694369.1. NC_000907.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi71421.HI0297.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC21961; AAC21961; HI_0297.
GeneIDi950200.
KEGGihin:HI0297.
PATRICi20189133. VBIHaeInf48452_0313.

Phylogenomic databases

eggNOGiCOG1459.
KOiK02505.
OMAiIKALRYP.
OrthoDBiEOG6Z6FTM.
PhylomeDBiP44621.

Family and domain databases

InterProiIPR003004. GspF/PilC.
IPR018076. T2SS_F.
IPR001992. Type_2_secretion_system_CS.
[Graphical view]
PfamiPF00482. T2SF. 2 hits.
[Graphical view]
PRINTSiPR00812. BCTERIALGSPF.
PROSITEiPS00874. T2SP_F. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 51907 / DSM 11121 / KW20 / Rd.

Entry informationi

Entry nameiHOFC_HAEIN
AccessioniPrimary (citable) accession number: P44621
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: November 1, 1995
Last modified: March 4, 2015
This is version 95 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Haemophilus influenzae
    Haemophilus influenzae (strain Rd): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.