P44483 (Y050_HAEIN) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Putative TRAP transporter large permease protein HI_0050

Gene names

Ordered Locus Names:

HI_0050

Organism

Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

Taxonomic identifier

71421 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Pasteurellales › Pasteurellaceae › Haemophilus

Protein attributes

Sequence length	401 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Subcellular location	Cell inner membrane; Multi-pass membrane protein Probable.
Sequence similarities	Belongs to the TRAP transporter large permease family.

Ontologies

Keywords
Biological process	Transport
Cellular component	Cell inner membrane Cell membrane Membrane
Domain	Transmembrane Transmembrane helix
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	transport Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW plasma membrane Inferred from electronic annotation. Source: UniProtKB-SubCell
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 401	401	Putative TRAP transporter large permease protein HI_0050		PRO_0000169600
Regions
	Transmembrane	31 – 51	21	Helical; Potential
	Transmembrane	70 – 90	21	Helical; Potential
	Transmembrane	115 – 135	21	Helical; Potential
	Transmembrane	144 – 164	21	Helical; Potential
	Transmembrane	193 – 213	21	Helical; Potential
	Transmembrane	217 – 237	21	Helical; Potential
	Transmembrane	253 – 273	21	Helical; Potential
	Transmembrane	290 – 310	21	Helical; Potential
	Transmembrane	330 – 350	21	Helical; Potential
	Transmembrane	353 – 373	21	Helical; Potential
	Transmembrane	375 – 395	21	Helical; Potential

Sequences

	Sequence		Length	Mass (Da)
	P44483 [UniParc]. Last modified November 1, 1995. Version 1. Checksum: 862855BAEBBE95CB	FASTA	401	42,991
	10 20 30 40 50 60 MLLSASIMLY HLDMFDTQLI TENFVMGTNN FPLMAIPFFM LTGEIMKHGG ISERIINFAT 70 80 90 100 110 120 SMVGHIKGGL GYVAIISGLI FAGLSGSAVA DTAALGAILI PMMISKKYDG ARSTGLICAA 130 140 150 160 170 180 GIISVVIPPS IPMIIYGITA GASITKLFMG GTVPGLLMVV GLWVTWKILY RNNDTSLERK 190 200 210 220 230 240 QTGKERWVAF KKAFWPLLLP IIIIVGLRGG IFTPTEAGVV AAIYAGIVSI AYKGLTFSKL 250 260 270 280 290 300 KDVFIGTIKT TSMVMFVAAS AMISAFAITV AQIPTELVQT IKGLTDSPTI LMFIIMLFLL 310 320 330 340 350 360 LVGCVMDLIP AVLIFVPVLL PVLRAYNIDI AYFGIMMVIN LSIGLITPPV GTVLYVGSGI 370 380 390 400 SKLGIGALSK GIAPFLFVYA IIMMLIVFFP EIVIVPMNWL S

References

[1]

"Whole-genome random sequencing and assembly of Haemophilus influenzae Rd." Fleischmann R.D., Adams M.D., White O., Clayton R.A., Kirkness E.F., Kerlavage A.R., Bult C.J., Tomb J.-F., Dougherty B.A., Merrick J.M., McKenney K., Sutton G.G., FitzHugh W., Fields C.A., Gocayne J.D., Scott J.D., Shirley R., Liu L.-I. , Glodek A., Kelley J.M., Weidman J.F., Phillips C.A., Spriggs T., Hedblom E., Cotton M.D., Utterback T.R., Hanna M.C., Nguyen D.T., Saudek D.M., Brandon R.C., Fine L.D., Fritchman J.L., Fuhrmann J.L., Geoghagen N.S.M., Gnehm C.L., McDonald L.A., Small K.V., Fraser C.M., Smith H.O., Venter J.C. Science 269:496-512(1995) [PubMed: 7542800] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 51907 / DSM 11121 / KW20 / Rd.

Cross-references

Sequence databases
EMBL GenBank DDBJ	L42023 Genomic DNA. Translation: AAC21728.1.
PIR	C64141.
RefSeq	NP_438223.1. NC_000907.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	950948.
GenomeReviews	Gene locus HI_0050 in contig L42023_GR.
PATRIC	20188553. VBIHaeInf48452_0050.
TIGR	HI_0050.
Phylogenomic databases
HOGENOM	HBG563446.
OMA	RISIIDI.
PhylomeDB	P44483.
ProtClustDB	CLSK2301762.
Enzyme and pathway databases
BioCyc	HINF71421:HI_0050-MONOMER.
Family and domain databases
InterPro	IPR010656. DctM. IPR004681. TRAP_transptDctM. [Graphical view]
Pfam	PF06808. DctM. 1 hit. [Graphical view]
TIGRFAMs	TIGR00786. DctM. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Y050_HAEIN

Accession

Primary (citable) accession number: P44483

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 1, 1995
Last sequence update:	November 1, 1995
Last modified:	January 25, 2012
This is version 71 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program