Reviewed,
UniProtKB/Swiss-Prot P44468 (RODA_HAEIN)
Last modified
November 24, 2009.
Version 59.
History...
Clusters with 100%,
90%,
50% identity |
Documents (2) |
Third-party data |
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Names and origin
| Protein names | Recommended name: Rod shape-determining protein rodA | ||||||
| Gene names |
| ||||||
| Organism | Haemophilus influenzae [Complete proteome] [HAMAP] | ||||||
| Taxonomic identifier | 727 [NCBI] | ||||||
| Taxonomic lineage | Bacteria › Proteobacteria › Gammaproteobacteria › Pasteurellales › Pasteurellaceae › Haemophilus |
Protein attributes
| Sequence length | 371 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Inferred from homology. |
General annotation (Comments)
| Function | This is one of the proteins responsible for the rod shape of the cell. It is required for the expression of the enzymatic activity of PBP2, which is thought to synthesize peptidoglycan in the step of initiation of cell elongation By similarity. |
| Subcellular location | Cell inner membrane; Multi-pass membrane protein By similarity. |
| Sequence similarities | Belongs to the ftsW/rodA/spoVE family. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Cell shape |
| Cellular component | Cell inner membrane Cell membrane Membrane |
| Domain | Transmembrane |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | cell cycle Inferred from electronic annotation. Source: InterPro regulation of cell shapeInferred from electronic annotation. Source: UniProtKB-KW |
| Cellular component | integral to membrane Inferred from electronic annotation. Source: UniProtKB-SubCell plasma membraneInferred from electronic annotation. Source: UniProtKB-KW |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 371 | 371 | Rod shape-determining protein rodA | PRO_0000062717 | |||||
Regions | |||||||||
| Transmembrane | 17 – 37 | 21 | Potential | ||||||
| Transmembrane | 51 – 71 | 21 | Potential | ||||||
| Transmembrane | 75 – 95 | 21 | Potential | ||||||
| Transmembrane | 111 – 131 | 21 | Potential | ||||||
| Transmembrane | 142 – 162 | 21 | Potential | ||||||
| Transmembrane | 172 – 192 | 21 | Potential | ||||||
| Transmembrane | 275 – 295 | 21 | Potential | ||||||
| Transmembrane | 313 – 333 | 21 | Potential | ||||||
| Transmembrane | 337 – 357 | 21 | Potential | ||||||
Sequences
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References
| [1] | "Whole-genome random sequencing and assembly of Haemophilus influenzae Rd." Fleischmann R.D., Adams M.D., White O., Clayton R.A., Kirkness E.F., Kerlavage A.R., Bult C.J., Tomb J.-F., Dougherty B.A., Merrick J.M., McKenney K., Sutton G.G., FitzHugh W., Fields C.A., Gocayne J.D., Scott J.D., Shirley R., Liu L.-I. Venter J.C.Science 269:496-512(1995) [PubMed: 7542800] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 51907 / DSM 11121 / KW20 / Rd. |
Cross-references
Sequence databases | |
|---|---|
| L42023 Genomic DNA. Translation: AAC21709.1. | |
| PIR | B64044. |
| RefSeq | NP_438204.1. |
3D structure databases | |
| ModBase | Search... |
Genome annotation databases | |
| GeneID | 950927. |
| GenomeReviews | Gene locus HI0031 in contig L42023_GR. |
| KEGG | hin:HI0031. |
| TIGR | HI0031. |
Phylogenomic databases | |
| HOGENOM | P44468. |
| OMA | NISKGAR |
Enzyme and pathway databases | |
| BioCyc | HINF71421:HI_0031-MON. |
Family and domain databases | |
| InterPro | IPR001182. Cell_cycle. IPR018365. Cell_cycle_FtsW-rel_CS. IPR011923. RodA_shape. [Graphical view] |
| Pfam | PF01098. FTSW_RODA_SPOVE. 1 hit. [Graphical view] |
| TIGRFAMs | TIGR02210. rodA_shape. 1 hit. |
| PROSITE | PS00428. FTSW_RODA_SPOVE. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | RODA_HAEIN | ||||||||
| Accession | Primary (citable) accession number: P44468 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes) | ||||||||
Relevant documents
| Haemophilus influenzae Haemophilus influenzae (strain Rd): entries and gene names |
| SIMILARITY comments Index of protein domains and families |

Clusters with


