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P44344

- RL3_HAEIN

UniProt

P44344 - RL3_HAEIN

Protein

50S ribosomal protein L3

Gene

rplC

Organism
Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 86 (01 Oct 2014)
      Sequence version 1 (01 Nov 1995)
      Previous versions | rss
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    Functioni

    One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.UniRule annotation

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-HAMAP
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L3UniRule annotation
    Gene namesi
    Name:rplCUniRule annotation
    Synonyms:rpl3UniRule annotation
    Ordered Locus Names:HI_0777
    OrganismiHaemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
    Taxonomic identifieri71421 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeHaemophilus
    ProteomesiUP000000579: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 20820850S ribosomal protein L3PRO_0000077106Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Modified residuei149 – 1491N5-methylglutamineUniRule annotation

    Post-translational modificationi

    Methylated by PrmB.UniRule annotation

    Keywords - PTMi

    Methylation

    Interactioni

    Subunit structurei

    Part of the 50S ribosomal subunit. Forms a cluster with proteins L14 and L19.UniRule annotation

    Protein-protein interaction databases

    STRINGi71421.HI0777.

    Structurei

    3D structure databases

    ProteinModelPortaliP44344.
    SMRiP44344. Positions 1-208.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L3P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0087.
    KOiK02906.
    OMAiSMQDATH.
    OrthoDBiEOG6WDSMH.
    PhylomeDBiP44344.

    Family and domain databases

    HAMAPiMF_01325_B. Ribosomal_L3_B.
    InterProiIPR000597. Ribosomal_L3.
    IPR019927. Ribosomal_L3_bac/org-type.
    IPR019926. Ribosomal_L3_CS.
    IPR009000. Transl_B-barrel.
    [Graphical view]
    PANTHERiPTHR11229. PTHR11229. 1 hit.
    PfamiPF00297. Ribosomal_L3. 1 hit.
    [Graphical view]
    SUPFAMiSSF50447. SSF50447. 1 hit.
    TIGRFAMsiTIGR03625. L3_bact. 1 hit.
    PROSITEiPS00474. RIBOSOMAL_L3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P44344-1 [UniParc]FASTAAdd to Basket

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    MIGLVGRKVG MTRIFNEDGV SVPVTVIEIE ANRVTQVKTL ENDGYTAVQV    50
    TTGSKKANRV TKPEAGHFVK AGVEAGRGLW EFRTEGEEFT LGQEINVDIF 100
    ADVKKVDVTG TSKGKGFQGG VKRWNFRTQD ATHGNSLSHR VLGSIGQNQT 150
    PGRVFKGKKM AGHLGAERVT VQSLEVVRVD AERKLLLVKG SVPGAINGDV 200
    IVKPAVKA 208
    Length:208
    Mass (Da):22,364
    Last modified:November 1, 1995 - v1
    Checksum:iBC73B3C0DC925228
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    L42023 Genomic DNA. Translation: AAC22436.1.
    U37797 Genomic DNA. Translation: AAB41510.1.
    PIRiE64092.
    RefSeqiNP_438936.1. NC_000907.1.

    Genome annotation databases

    EnsemblBacteriaiAAC22436; AAC22436; HI_0777.
    GeneIDi950820.
    KEGGihin:HI0777.
    PATRICi20190205. VBIHaeInf48452_0816.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    L42023 Genomic DNA. Translation: AAC22436.1 .
    U37797 Genomic DNA. Translation: AAB41510.1 .
    PIRi E64092.
    RefSeqi NP_438936.1. NC_000907.1.

    3D structure databases

    ProteinModelPortali P44344.
    SMRi P44344. Positions 1-208.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 71421.HI0777.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAC22436 ; AAC22436 ; HI_0777 .
    GeneIDi 950820.
    KEGGi hin:HI0777.
    PATRICi 20190205. VBIHaeInf48452_0816.

    Phylogenomic databases

    eggNOGi COG0087.
    KOi K02906.
    OMAi SMQDATH.
    OrthoDBi EOG6WDSMH.
    PhylomeDBi P44344.

    Family and domain databases

    HAMAPi MF_01325_B. Ribosomal_L3_B.
    InterProi IPR000597. Ribosomal_L3.
    IPR019927. Ribosomal_L3_bac/org-type.
    IPR019926. Ribosomal_L3_CS.
    IPR009000. Transl_B-barrel.
    [Graphical view ]
    PANTHERi PTHR11229. PTHR11229. 1 hit.
    Pfami PF00297. Ribosomal_L3. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50447. SSF50447. 1 hit.
    TIGRFAMsi TIGR03625. L3_bact. 1 hit.
    PROSITEi PS00474. RIBOSOMAL_L3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 51907 / DSM 11121 / KW20 / Rd.
    2. Zengel J.M., Vorozheikina D., Li X., Lindahl L.
      Submitted (OCT-1995) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 192-208.

    Entry informationi

    Entry nameiRL3_HAEIN
    AccessioniPrimary (citable) accession number: P44344
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 1, 1995
    Last sequence update: November 1, 1995
    Last modified: October 1, 2014
    This is version 86 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Haemophilus influenzae
      Haemophilus influenzae (strain Rd): entries and gene names
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3