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P44344

- RL3_HAEIN

UniProt

P44344 - RL3_HAEIN

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Protein

50S ribosomal protein L3

Gene

rplC

Organism
Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.UniRule annotation

GO - Molecular functioni

  1. rRNA binding Source: UniProtKB-HAMAP
  2. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L3UniRule annotation
Gene namesi
Name:rplCUniRule annotation
Synonyms:rpl3UniRule annotation
Ordered Locus Names:HI_0777
OrganismiHaemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Taxonomic identifieri71421 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeHaemophilus
ProteomesiUP000000579: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 20820850S ribosomal protein L3PRO_0000077106Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei149 – 1491N5-methylglutamineUniRule annotation

Post-translational modificationi

Methylated by PrmB.UniRule annotation

Keywords - PTMi

Methylation

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit. Forms a cluster with proteins L14 and L19.UniRule annotation

Protein-protein interaction databases

STRINGi71421.HI0777.

Structurei

3D structure databases

ProteinModelPortaliP44344.
SMRiP44344. Positions 1-208.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L3P family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0087.
KOiK02906.
OMAiSMQDATH.
OrthoDBiEOG6WDSMH.
PhylomeDBiP44344.

Family and domain databases

HAMAPiMF_01325_B. Ribosomal_L3_B.
InterProiIPR000597. Ribosomal_L3.
IPR019927. Ribosomal_L3_bac/org-type.
IPR019926. Ribosomal_L3_CS.
IPR009000. Transl_B-barrel.
[Graphical view]
PANTHERiPTHR11229. PTHR11229. 1 hit.
PfamiPF00297. Ribosomal_L3. 1 hit.
[Graphical view]
SUPFAMiSSF50447. SSF50447. 1 hit.
TIGRFAMsiTIGR03625. L3_bact. 1 hit.
PROSITEiPS00474. RIBOSOMAL_L3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P44344 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MIGLVGRKVG MTRIFNEDGV SVPVTVIEIE ANRVTQVKTL ENDGYTAVQV
60 70 80 90 100
TTGSKKANRV TKPEAGHFVK AGVEAGRGLW EFRTEGEEFT LGQEINVDIF
110 120 130 140 150
ADVKKVDVTG TSKGKGFQGG VKRWNFRTQD ATHGNSLSHR VLGSIGQNQT
160 170 180 190 200
PGRVFKGKKM AGHLGAERVT VQSLEVVRVD AERKLLLVKG SVPGAINGDV

IVKPAVKA
Length:208
Mass (Da):22,364
Last modified:November 1, 1995 - v1
Checksum:iBC73B3C0DC925228
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
L42023 Genomic DNA. Translation: AAC22436.1.
U37797 Genomic DNA. Translation: AAB41510.1.
PIRiE64092.
RefSeqiNP_438936.1. NC_000907.1.

Genome annotation databases

EnsemblBacteriaiAAC22436; AAC22436; HI_0777.
GeneIDi950820.
KEGGihin:HI0777.
PATRICi20190205. VBIHaeInf48452_0816.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
L42023 Genomic DNA. Translation: AAC22436.1 .
U37797 Genomic DNA. Translation: AAB41510.1 .
PIRi E64092.
RefSeqi NP_438936.1. NC_000907.1.

3D structure databases

ProteinModelPortali P44344.
SMRi P44344. Positions 1-208.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 71421.HI0777.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAC22436 ; AAC22436 ; HI_0777 .
GeneIDi 950820.
KEGGi hin:HI0777.
PATRICi 20190205. VBIHaeInf48452_0816.

Phylogenomic databases

eggNOGi COG0087.
KOi K02906.
OMAi SMQDATH.
OrthoDBi EOG6WDSMH.
PhylomeDBi P44344.

Family and domain databases

HAMAPi MF_01325_B. Ribosomal_L3_B.
InterProi IPR000597. Ribosomal_L3.
IPR019927. Ribosomal_L3_bac/org-type.
IPR019926. Ribosomal_L3_CS.
IPR009000. Transl_B-barrel.
[Graphical view ]
PANTHERi PTHR11229. PTHR11229. 1 hit.
Pfami PF00297. Ribosomal_L3. 1 hit.
[Graphical view ]
SUPFAMi SSF50447. SSF50447. 1 hit.
TIGRFAMsi TIGR03625. L3_bact. 1 hit.
PROSITEi PS00474. RIBOSOMAL_L3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 51907 / DSM 11121 / KW20 / Rd.
  2. Zengel J.M., Vorozheikina D., Li X., Lindahl L.
    Submitted (OCT-1995) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 192-208.

Entry informationi

Entry nameiRL3_HAEIN
AccessioniPrimary (citable) accession number: P44344
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: November 1, 1995
Last modified: October 1, 2014
This is version 86 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Haemophilus influenzae
    Haemophilus influenzae (strain Rd): entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3