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P43969 (PERM_HAEIN) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 72. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Putative permease PerM homolog
Gene names
Name:perM
Ordered Locus Names:HI_0237
OrganismHaemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) [Reference proteome] [HAMAP]
Taxonomic identifier71421 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeHaemophilus

Protein attributes

Sequence length349 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Subcellular location

Cell membrane; Multi-pass membrane protein Potential.

Sequence similarities

Belongs to the UPF0118 (PerM) family.

Sequence caution

The sequence L42023 differs from that shown. Reason: Frameshift at position 201.

Ontologies

Keywords
   Biological processTransport
   Cellular componentCell membrane
Membrane
   DomainTransmembrane
Transmembrane helix
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processtransport

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: UniProtKB-KW

plasma membrane

Inferred from electronic annotation. Source: UniProtKB-SubCell

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 349349Putative permease PerM homolog
PRO_0000148296

Regions

Transmembrane24 – 4421Helical; Potential
Transmembrane72 – 9221Helical; Potential
Transmembrane157 – 17721Helical; Potential
Transmembrane221 – 24121Helical; Potential
Transmembrane251 – 27121Helical; Potential
Transmembrane282 – 30221Helical; Potential
Transmembrane311 – 33121Helical; Potential

Sequences

Sequence LengthMass (Da)Tools
P43969 [UniParc].

Last modified November 1, 1997. Version 2.
Checksum: 523E015BF9ADB0E7

FASTA34939,307
        10         20         30         40         50         60 
MLEMLKSWYS RRLSDPQAMG LLAILLFGFI SIYFFGDLIA PLLIALVLSY LLEIPINFLN 

        70         80         90        100        110        120 
QYLKCPRMLA TILIFGSFIG LAAVFFLVLV PMLWNQTISL LSDLPAMFNK SNEWLLNLPK 

       130        140        150        160        170        180 
NYPELIDYSM VDSIFNSVRE KILGFGESAV KLSLASIMNL VSLGIYAFLV PLMMFFMLKD 

       190        200        210        220        230        240 
KSELLQGVSR FLPKNRNLAF XRWKEMQQQI SNYIHGKLLE ILIVTLITYI IFLIFGLNYP 

       250        260        270        280        290        300 
LLLAFAVGLS VLVPYIGAVI VTIPVALVAL FQFGISPTFW YIIIAFAVSQ LLDGNLLVPY 

       310        320        330        340 
LFSEAVNLHP LIIIISVLIF GGLWGFWGVF FAIPLATLVK AVINALPQD 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
L42023 Genomic DNA. No translation available.
PIRF64004.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Phylogenomic databases

OMAMPVAWQQ.

Family and domain databases

InterProIPR002549. UPF0118.
[Graphical view]
PANTHERPTHR21716. PTHR21716. 1 hit.
PfamPF01594. UPF0118. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry namePERM_HAEIN
AccessionPrimary (citable) accession number: P43969
Secondary accession number(s): P43970
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: November 1, 1997
Last modified: February 19, 2014
This is version 72 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Uncharacterized protein families (UPF)

List of uncharacterized protein family (UPF) entries

SIMILARITY comments

Index of protein domains and families

Haemophilus influenzae

Haemophilus influenzae (strain Rd): entries and gene names