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Protein

Putative permease PerM homolog

Gene

perM

Organism
Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

  1. transport Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Transport

Names & Taxonomyi

Protein namesi
Recommended name:
Putative permease PerM homolog
Gene namesi
Name:perM
Ordered Locus Names:HI_0237
OrganismiHaemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Taxonomic identifieri71421 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeHaemophilus
ProteomesiUP000000579: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei24 – 4421HelicalSequence AnalysisAdd
BLAST
Transmembranei72 – 9221HelicalSequence AnalysisAdd
BLAST
Transmembranei157 – 17721HelicalSequence AnalysisAdd
BLAST
Transmembranei221 – 24121HelicalSequence AnalysisAdd
BLAST
Transmembranei251 – 27121HelicalSequence AnalysisAdd
BLAST
Transmembranei282 – 30221HelicalSequence AnalysisAdd
BLAST
Transmembranei311 – 33121HelicalSequence AnalysisAdd
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
  2. plasma membrane Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 349349Putative permease PerM homologPRO_0000148296Add
BLAST

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0118 (PerM) family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

OMAiMPVAWQQ.

Family and domain databases

InterProiIPR002549. UPF0118.
[Graphical view]
PANTHERiPTHR21716. PTHR21716. 1 hit.
PfamiPF01594. UPF0118. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P43969-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MLEMLKSWYS RRLSDPQAMG LLAILLFGFI SIYFFGDLIA PLLIALVLSY
60 70 80 90 100
LLEIPINFLN QYLKCPRMLA TILIFGSFIG LAAVFFLVLV PMLWNQTISL
110 120 130 140 150
LSDLPAMFNK SNEWLLNLPK NYPELIDYSM VDSIFNSVRE KILGFGESAV
160 170 180 190 200
KLSLASIMNL VSLGIYAFLV PLMMFFMLKD KSELLQGVSR FLPKNRNLAF
210 220 230 240 250
XRWKEMQQQI SNYIHGKLLE ILIVTLITYI IFLIFGLNYP LLLAFAVGLS
260 270 280 290 300
VLVPYIGAVI VTIPVALVAL FQFGISPTFW YIIIAFAVSQ LLDGNLLVPY
310 320 330 340
LFSEAVNLHP LIIIISVLIF GGLWGFWGVF FAIPLATLVK AVINALPQD
Length:349
Mass (Da):39,307
Last modified:November 1, 1997 - v2
Checksum:i523E015BF9ADB0E7
GO

Sequence cautioni

The sequence L42023 differs from that shown. Reason: Frameshift at position 201. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L42023 Genomic DNA. No translation available.
PIRiF64004.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L42023 Genomic DNA. No translation available.
PIRiF64004.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

OMAiMPVAWQQ.

Family and domain databases

InterProiIPR002549. UPF0118.
[Graphical view]
PANTHERiPTHR21716. PTHR21716. 1 hit.
PfamiPF01594. UPF0118. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 51907 / DSM 11121 / KW20 / Rd.

Entry informationi

Entry nameiPERM_HAEIN
AccessioniPrimary (citable) accession number: P43969
Secondary accession number(s): P43970
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: November 1, 1997
Last modified: January 7, 2015
This is version 76 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Haemophilus influenzae
    Haemophilus influenzae (strain Rd): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.