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P43822 (SYGB_HAEIN) Reviewed, UniProtKB/Swiss-Prot

Last modified July 9, 2014. Version 101. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycine--tRNA ligase beta subunit

EC=6.1.1.14
Alternative name(s):
Glycyl-tRNA synthetase beta subunit
Short name=GlyRS
Gene names
Name:glyS
Ordered Locus Names:HI_0924
OrganismHaemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) [Reference proteome] [HAMAP]
Taxonomic identifier71421 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeHaemophilus

Protein attributes

Sequence length688 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly). HAMAP-Rule MF_00255

Subunit structure

Tetramer of two alpha and two beta subunits By similarity.

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00255.

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family.

Ontologies

Keywords
   Biological processProtein biosynthesis
   Cellular componentCytoplasm
   LigandATP-binding
Nucleotide-binding
   Molecular functionAminoacyl-tRNA synthetase
Ligase
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processarginyl-tRNA aminoacylation

Inferred from electronic annotation. Source: InterPro

glycyl-tRNA aminoacylation

Inferred from electronic annotation. Source: InterPro

   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functionATP binding

Inferred from electronic annotation. Source: UniProtKB-KW

arginine-tRNA ligase activity

Inferred from electronic annotation. Source: InterPro

glycine-tRNA ligase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 688688Glycine--tRNA ligase beta subunit HAMAP-Rule MF_00255
PRO_0000072904

Sequences

Sequence LengthMass (Da)Tools
P43822 [UniParc].

Last modified November 1, 1995. Version 1.
Checksum: 67F9ACEF00A94184

FASTA68875,613
        10         20         30         40         50         60 
MTTQNFLVEI GTEELPPKAL KTLATSFADN VEAELNQAGL SFDKIEWFAA PRRLAVKVLN 

        70         80         90        100        110        120 
LATQQPSKEI EKRGPAVSAA FDAEGKPTKA AEGWARGCGI TVEQAERIAT DKGEWLIHRA 

       130        140        150        160        170        180 
KIEGQPTKNL LNDIVANALA KLPIPKPMRW ADKTVQFIRP VHTVTMLLGD ELIEGEILGV 

       190        200        210        220        230        240 
ASARTIRGHR FLGEKEFYIQ HADQYPQLLR EKGSVVADFN ERKAEILAKS QAKATALGGV 

       250        260        270        280        290        300 
ADIEESLLEE VTSLVEYPNV LAAKFEEHFL AVPAEALVYT MKGDQKYFPI YDKDGKLLPH 

       310        320        330        340        350        360 
FIFVSNINPE DPTAIIEGNE KVVRPRLTDA EFFFKTDLKQ KLVDRLPRLE TVLFQQQLGT 

       370        380        390        400        410        420 
LKDKTDRIEQ LAGEIAKQIG ADEAKAKRAG LLSKCDLMTN MVFEFTDTQG VMGMHYARHD 

       430        440        450        460        470        480 
GEDEEVAVAL NEQYMPRFAG DELPKSLVAS AVALADKFDT LTGIFGIGQA PKGSADPFAL 

       490        500        510        520        530        540 
RRAALGALRI IVEKNLPLDL EDLVKKSAAL FGDKLTNQNV VADVVDFMLG RFRAWYQDEG 

       550        560        570        580        590        600 
IAVDVIQAVL ARRPTRPADF DARVRAVSHF RTLDSAEALA AANKRVSNIL AKAGAAIGEI 

       610        620        630        640        650        660 
NLTACVEPAE KALAEAVLAL RTEVQPLIAQ GDYTTVLDKL ANLRAPVDSF FDNVMVNAED 

       670        680 
PALRQNRLAI LNTLQGLFLQ VADISVLQ 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
L42023 Genomic DNA. Translation: AAC22584.1.
PIRB64103.
RefSeqNP_439084.1. NC_000907.1.

3D structure databases

ProteinModelPortalP43822.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING71421.HI0924.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAC22584; AAC22584; HI_0924.
GeneID949922.
KEGGhin:HI0924.
PATRIC20190505. VBIHaeInf48452_0965.

Phylogenomic databases

eggNOGCOG0751.
KOK01879.
OMALPIPKRM.
OrthoDBEOG661H9S.
PhylomeDBP43822.

Family and domain databases

Gene3D1.10.730.10. 1 hit.
HAMAPMF_00255. Gly_tRNA_synth_beta.
InterProIPR008909. DALR_anticod-bd.
IPR015944. Gly-tRNA-synth_bsu.
IPR006194. Gly-tRNA-synth_heterodimer.
IPR009080. tRNAsynth_1a_anticodon-bd.
[Graphical view]
PfamPF05746. DALR_1. 1 hit.
PF02092. tRNA_synt_2f. 1 hit.
[Graphical view]
PRINTSPR01045. TRNASYNTHGB.
SMARTSM00836. DALR_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR00211. glyS. 1 hit.
PROSITEPS50861. AA_TRNA_LIGASE_II_GLYAB. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameSYGB_HAEIN
AccessionPrimary (citable) accession number: P43822
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: November 1, 1995
Last modified: July 9, 2014
This is version 101 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Haemophilus influenzae

Haemophilus influenzae (strain Rd): entries and gene names

Aminoacyl-tRNA synthetases

List of aminoacyl-tRNA synthetase entries