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P43822

- SYGB_HAEIN

UniProt

P43822 - SYGB_HAEIN

Protein

Glycine--tRNA ligase beta subunit

Gene

glyS

Organism
Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 103 (01 Oct 2014)
      Sequence version 1 (01 Nov 1995)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly).

    GO - Molecular functioni

    1. arginine-tRNA ligase activity Source: InterPro
    2. ATP binding Source: UniProtKB-KW
    3. glycine-tRNA ligase activity Source: UniProtKB-EC

    GO - Biological processi

    1. arginyl-tRNA aminoacylation Source: InterPro
    2. glycyl-tRNA aminoacylation Source: InterPro

    Keywords - Molecular functioni

    Aminoacyl-tRNA synthetase, Ligase

    Keywords - Biological processi

    Protein biosynthesis

    Keywords - Ligandi

    ATP-binding, Nucleotide-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glycine--tRNA ligase beta subunit (EC:6.1.1.14)
    Alternative name(s):
    Glycyl-tRNA synthetase beta subunit
    Short name:
    GlyRS
    Gene namesi
    Name:glyS
    Ordered Locus Names:HI_0924
    OrganismiHaemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
    Taxonomic identifieri71421 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeHaemophilus
    ProteomesiUP000000579: Chromosome

    Subcellular locationi

    Cytoplasm By similarity

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 688688Glycine--tRNA ligase beta subunitPRO_0000072904Add
    BLAST

    Interactioni

    Subunit structurei

    Tetramer of two alpha and two beta subunits.By similarity

    Protein-protein interaction databases

    STRINGi71421.HI0924.

    Structurei

    3D structure databases

    ProteinModelPortaliP43822.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Phylogenomic databases

    eggNOGiCOG0751.
    KOiK01879.
    OMAiLPIPKRM.
    OrthoDBiEOG661H9S.
    PhylomeDBiP43822.

    Family and domain databases

    Gene3Di1.10.730.10. 1 hit.
    HAMAPiMF_00255. Gly_tRNA_synth_beta.
    InterProiIPR008909. DALR_anticod-bd.
    IPR015944. Gly-tRNA-synth_bsu.
    IPR006194. Gly-tRNA-synth_heterodimer.
    IPR009080. tRNAsynth_1a_anticodon-bd.
    [Graphical view]
    PfamiPF05746. DALR_1. 1 hit.
    PF02092. tRNA_synt_2f. 1 hit.
    [Graphical view]
    PRINTSiPR01045. TRNASYNTHGB.
    SMARTiSM00836. DALR_1. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR00211. glyS. 1 hit.
    PROSITEiPS50861. AA_TRNA_LIGASE_II_GLYAB. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P43822-1 [UniParc]FASTAAdd to Basket

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    MTTQNFLVEI GTEELPPKAL KTLATSFADN VEAELNQAGL SFDKIEWFAA    50
    PRRLAVKVLN LATQQPSKEI EKRGPAVSAA FDAEGKPTKA AEGWARGCGI 100
    TVEQAERIAT DKGEWLIHRA KIEGQPTKNL LNDIVANALA KLPIPKPMRW 150
    ADKTVQFIRP VHTVTMLLGD ELIEGEILGV ASARTIRGHR FLGEKEFYIQ 200
    HADQYPQLLR EKGSVVADFN ERKAEILAKS QAKATALGGV ADIEESLLEE 250
    VTSLVEYPNV LAAKFEEHFL AVPAEALVYT MKGDQKYFPI YDKDGKLLPH 300
    FIFVSNINPE DPTAIIEGNE KVVRPRLTDA EFFFKTDLKQ KLVDRLPRLE 350
    TVLFQQQLGT LKDKTDRIEQ LAGEIAKQIG ADEAKAKRAG LLSKCDLMTN 400
    MVFEFTDTQG VMGMHYARHD GEDEEVAVAL NEQYMPRFAG DELPKSLVAS 450
    AVALADKFDT LTGIFGIGQA PKGSADPFAL RRAALGALRI IVEKNLPLDL 500
    EDLVKKSAAL FGDKLTNQNV VADVVDFMLG RFRAWYQDEG IAVDVIQAVL 550
    ARRPTRPADF DARVRAVSHF RTLDSAEALA AANKRVSNIL AKAGAAIGEI 600
    NLTACVEPAE KALAEAVLAL RTEVQPLIAQ GDYTTVLDKL ANLRAPVDSF 650
    FDNVMVNAED PALRQNRLAI LNTLQGLFLQ VADISVLQ 688
    Length:688
    Mass (Da):75,613
    Last modified:November 1, 1995 - v1
    Checksum:i67F9ACEF00A94184
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    L42023 Genomic DNA. Translation: AAC22584.1.
    PIRiB64103.
    RefSeqiNP_439084.1. NC_000907.1.
    WP_005693270.1. NC_000907.1.

    Genome annotation databases

    EnsemblBacteriaiAAC22584; AAC22584; HI_0924.
    GeneIDi949922.
    KEGGihin:HI0924.
    PATRICi20190505. VBIHaeInf48452_0965.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    L42023 Genomic DNA. Translation: AAC22584.1 .
    PIRi B64103.
    RefSeqi NP_439084.1. NC_000907.1.
    WP_005693270.1. NC_000907.1.

    3D structure databases

    ProteinModelPortali P43822.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 71421.HI0924.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAC22584 ; AAC22584 ; HI_0924 .
    GeneIDi 949922.
    KEGGi hin:HI0924.
    PATRICi 20190505. VBIHaeInf48452_0965.

    Phylogenomic databases

    eggNOGi COG0751.
    KOi K01879.
    OMAi LPIPKRM.
    OrthoDBi EOG661H9S.
    PhylomeDBi P43822.

    Family and domain databases

    Gene3Di 1.10.730.10. 1 hit.
    HAMAPi MF_00255. Gly_tRNA_synth_beta.
    InterProi IPR008909. DALR_anticod-bd.
    IPR015944. Gly-tRNA-synth_bsu.
    IPR006194. Gly-tRNA-synth_heterodimer.
    IPR009080. tRNAsynth_1a_anticodon-bd.
    [Graphical view ]
    Pfami PF05746. DALR_1. 1 hit.
    PF02092. tRNA_synt_2f. 1 hit.
    [Graphical view ]
    PRINTSi PR01045. TRNASYNTHGB.
    SMARTi SM00836. DALR_1. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR00211. glyS. 1 hit.
    PROSITEi PS50861. AA_TRNA_LIGASE_II_GLYAB. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 51907 / DSM 11121 / KW20 / Rd.

    Entry informationi

    Entry nameiSYGB_HAEIN
    AccessioniPrimary (citable) accession number: P43822
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 1, 1995
    Last sequence update: November 1, 1995
    Last modified: October 1, 2014
    This is version 103 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Aminoacyl-tRNA synthetases
      List of aminoacyl-tRNA synthetase entries
    2. Haemophilus influenzae
      Haemophilus influenzae (strain Rd): entries and gene names
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3