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Protein

CCR4-associated factor 16

Gene

CAF16

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Miscellaneous

Present with 1620 molecules/cell in log phase SD medium.1 Publication

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi41 – 48ATPPROSITE-ProRule annotation8

GO - Molecular functioni

  • ATPase activity Source: SGD
  • ATP binding Source: UniProtKB-KW

GO - Biological processi

  • regulation of transcription by RNA polymerase II Source: SGD

Keywordsi

LigandATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciYEAST:G3O-30432-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
CCR4-associated factor 16
Gene namesi
Name:CAF16
Ordered Locus Names:YFL028C
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
Proteomesi
  • UP000002311 Componenti: Chromosome VI

Organism-specific databases

EuPathDBiFungiDB:YFL028C
SGDiS000001866 CAF16

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cytoplasm, Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000934641 – 289CCR4-associated factor 16Add BLAST289

Proteomic databases

MaxQBiP43569
PaxDbiP43569
PRIDEiP43569

PTM databases

CarbonylDBiP43569

Interactioni

Subunit structurei

Interacts with CCR4 and SSN2.1 Publication

Binary interactionsi

WithEntry#Exp.IntActNotes
SAH1P399543EBI-22808,EBI-16451

Protein-protein interaction databases

BioGridi31118, 44 interactors
DIPiDIP-5946N
IntActiP43569, 3 interactors
STRINGi4932.YFL028C

Structurei

3D structure databases

ProteinModelPortaliP43569
SMRiP43569
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini7 – 249ABC transporterPROSITE-ProRule annotationAdd BLAST243

Sequence similaritiesi

Belongs to the ABC transporter superfamily.Curated

Phylogenomic databases

HOGENOMiHOG000200636
InParanoidiP43569
KOiK12608
OMAiQLAMGLI
OrthoDBiEOG092C404D

Family and domain databases

InterProiView protein in InterPro
IPR003593 AAA+_ATPase
IPR003439 ABC_transporter-like
IPR027417 P-loop_NTPase
PfamiView protein in Pfam
PF00005 ABC_tran, 1 hit
SMARTiView protein in SMART
SM00382 AAA, 1 hit
SUPFAMiSSF52540 SSF52540, 1 hit
PROSITEiView protein in PROSITE
PS50893 ABC_TRANSPORTER_2, 1 hit

Sequencei

Sequence statusi: Complete.

P43569-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVSQFAIEVR NLTYKFKESS DPSVVDINLQ IPWNTRSLVV GANGAGKSTL
60 70 80 90 100
LKLLSGKHLC LDGKILVNGL DPFSPLSMNQ VDDDESVEDS TNYQTTTYLG
110 120 130 140 150
TEWCHMSIIN RDIGVLELLK SIGFDHFRER GERLVRILDI DVRWRMHRLS
160 170 180 190 200
DGQKRRVQLA MGLLKPWRVL LLDEVTVDLD VIARARLLEF LKWETETRRC
210 220 230 240 250
SVVYATHIFD GLAKWPNQVY HMKSGKIVDN LDYQKDVEFS EVVNAKVNGQ
260 270 280
VAFENDNNKV VISKVNSLHP LALEWLKRDN QIPDKEIGI
Length:289
Mass (Da):33,090
Last modified:November 1, 1995 - v1
Checksum:i2250CC15F9CE1354
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D50617 Genomic DNA Translation: BAA09210.1
BK006940 Genomic DNA Translation: DAA12412.1
PIRiS56226
RefSeqiNP_116625.1, NM_001179938.1

Genome annotation databases

EnsemblFungiiBAA09210; BAA09210; BAA09210
YFL028C; YFL028C; YFL028C
GeneIDi850516
KEGGisce:YFL028C

Similar proteinsi

Entry informationi

Entry nameiCAF16_YEAST
AccessioniPrimary (citable) accession number: P43569
Secondary accession number(s): D6VTK2
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: November 1, 1995
Last modified: May 23, 2018
This is version 144 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  3. Yeast chromosome VI
    Yeast (Saccharomyces cerevisiae) chromosome VI: entries and gene names

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