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P43545 (SNZ3_YEAST) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 111. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Probable pyridoxine biosynthesis protein SNZ3
Alternative name(s):
PDX1 homolog 3
Gene names
Name:SNZ3
Ordered Locus Names:YFL059W
OrganismSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) [Reference proteome]
Taxonomic identifier559292 [NCBI]
Taxonomic lineageEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces

Protein attributes

Sequence length298 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Function

May be required for the production of pyridoxine (vitamin B6). Ref.3

Induction

By the absence of external thiamine. Ref.3

Sequence similarities

Belongs to the PdxS/SNZ family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 298298Probable pyridoxine biosynthesis protein SNZ3 HAMAP-Rule MF_01824
PRO_0000109360

Sequences

Sequence LengthMass (Da)Tools
P43545 [UniParc].

Last modified November 1, 1995. Version 1.
Checksum: FDBADC5546C460AC

FASTA29832,019
        10         20         30         40         50         60 
MSEFKVKTGL AQMLKGGVIM DVVTPEQAII AERAGACAVM ALERIPADMR KSGQVCRMSD 

        70         80         90        100        110        120 
PRMIKEIMEA VSIPVMAKVR IGHFVEAQIL EELQVDYIDE SEVLTPADWT HHIEKHNFKV 

       130        140        150        160        170        180 
PFVCGAKDLG EALRRINEGA AMIRTKGEAG TGDVSEAVKH ITKIKAEIQQ YKENLKTESD 

       190        200        210        220        230        240 
FAAKATELRV PVDLLKTTLS EGKLPVVNFA AGGVATPADA ALLMQLGCEG VFVGSGIFKS 

       250        260        270        280        290 
SDPEKLACAI VEATTHYDNP AKLLQVSSDL GDLMGGISIQ SINEAGGKNG ARLSEIGW 

« Hide

References

« Hide 'large scale' references
[1]"Analysis of the nucleotide sequence of chromosome VI from Saccharomyces cerevisiae."
Murakami Y., Naitou M., Hagiwara H., Shibata T., Ozawa M., Sasanuma S., Sasanuma M., Tsuchiya Y., Soeda E., Yokoyama K., Yamazaki M., Tashiro H., Eki T.
Nat. Genet. 10:261-268(1995) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 204508 / S288c.
[2]Saccharomyces Genome Database
Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: ATCC 204508 / S288c.
[3]"Functional analysis of yeast gene families involved in metabolism of vitamins B1 and B6."
Rodriguez-Navarro S., Llorente B., Rodriguez-Manzaneque M.T., Ramne A., Uber G., Marchesan D., Dujon B., Herrero E., Sunnerhagen P., Perez-Ortin J.E.
Yeast 19:1261-1276(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: PROBABLE FUNCTION, INDUCTION.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
D50617 Genomic DNA. Translation: BAA09182.1.
BK006940 Genomic DNA. Translation: DAA12381.1.
PIRS56196.
RefSeqNP_116596.1. NM_001179908.1.

3D structure databases

ProteinModelPortalP43545.
SMRP43545. Positions 14-271.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

BioGrid31088. 12 interactions.
DIPDIP-1644N.
IntActP43545. 13 interactions.
MINTMINT-409112.
STRING4932.YFL059W.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblFungiYFL059W; YFL059W; YFL059W.
GeneID850485.
KEGGsce:YFL059W.

Organism-specific databases

CYGDYFL059w.
SGDS000001835. SNZ3.

Phylogenomic databases

GeneTreeENSGT00390000018460.
HOGENOMHOG000227586.
KOK06215.
OMAPEERMAG.
OrthoDBEOG7TN031.

Enzyme and pathway databases

BioCycYEAST:G3O-30408-MONOMER.

Gene expression databases

GenevestigatorP43545.

Family and domain databases

Gene3D3.20.20.70. 2 hits.
HAMAPMF_01824. PdxS.
InterProIPR013785. Aldolase_TIM.
IPR011060. RibuloseP-bd_barrel.
IPR001852. Snz1p/Sor1.
[Graphical view]
PfamPF01680. SOR_SNZ. 1 hit.
[Graphical view]
PIRSFPIRSF029271. Pdx1. 1 hit.
SUPFAMSSF51366. SSF51366. 1 hit.
TIGRFAMsTIGR00343. TIGR00343. 1 hit.
PROSITEPS01235. PDXS_SNZ_1. 1 hit.
PS51129. PDXS_SNZ_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio966149.

Entry information

Entry nameSNZ3_YEAST
AccessionPrimary (citable) accession number: P43545
Secondary accession number(s): D6VTH1
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: November 1, 1995
Last modified: February 19, 2014
This is version 111 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Relevant documents

Yeast chromosome VI

Yeast (Saccharomyces cerevisiae) chromosome VI: entries and gene names

Yeast

Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD

SIMILARITY comments

Index of protein domains and families