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P43544 (SNO3_YEAST) Reviewed, UniProtKB/Swiss-Prot

Last modified June 11, 2014. Version 102. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Probable glutamine amidotransferase SNO3

EC=2.6.-.-
Gene names
Name:SNO3
Ordered Locus Names:YFL060C
OrganismSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) [Reference proteome]
Taxonomic identifier559292 [NCBI]
Taxonomic lineageEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces

Protein attributes

Sequence length222 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

May be required for the production of pyridoxine (vitamin B6). Ref.3

Miscellaneous

Present with 195 molecules/cell in log phase SD medium.

Sequence similarities

Belongs to the glutamine amidotransferase PdxT/SNO family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 222222Probable glutamine amidotransferase SNO3
PRO_0000135621

Sites

Active site911Nucleophile By similarity
Active site1971 By similarity
Active site1991 By similarity
Binding site1201Glutamine Potential

Sequences

Sequence LengthMass (Da)Tools
P43544 [UniParc].

Last modified November 1, 1995. Version 1.
Checksum: C7A0EFA9826FB77C

FASTA22225,132
        10         20         30         40         50         60 
MTVVIGVLAL QGAFIEHVRH VEKCIVENRD FYEKKLSVMT VKDKNQLAQC DALIIPGGES 

        70         80         90        100        110        120 
TAMSLIAERT GFYDDLYAFV HNPSKVTWGT CAGLIYISQQ LSNEAKLVKT LNLLKVKVKR 

       130        140        150        160        170        180 
NAFGRQAQSS TRICDFSNFI PHCNDFPATF IRAPVIEEVL DPEHVQVLYK LDGKDNGGQE 

       190        200        210        220 
LIVAAKQKNN ILATSFHPEL AENDIRFHDW FIREFVLKNY SK 

« Hide

References

« Hide 'large scale' references
[1]"Analysis of the nucleotide sequence of chromosome VI from Saccharomyces cerevisiae."
Murakami Y., Naitou M., Hagiwara H., Shibata T., Ozawa M., Sasanuma S., Sasanuma M., Tsuchiya Y., Soeda E., Yokoyama K., Yamazaki M., Tashiro H., Eki T.
Nat. Genet. 10:261-268(1995) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 204508 / S288c.
[2]"The reference genome sequence of Saccharomyces cerevisiae: Then and now."
Engel S.R., Dietrich F.S., Fisk D.G., Binkley G., Balakrishnan R., Costanzo M.C., Dwight S.S., Hitz B.C., Karra K., Nash R.S., Weng S., Wong E.D., Lloyd P., Skrzypek M.S., Miyasato S.R., Simison M., Cherry J.M.
G3 (Bethesda) 4:389-398(2014) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: ATCC 204508 / S288c.
[3]"Functional analysis of yeast gene families involved in metabolism of vitamins B1 and B6."
Rodriguez-Navarro S., Llorente B., Rodriguez-Manzaneque M.T., Ramne A., Uber G., Marchesan D., Dujon B., Herrero E., Sunnerhagen P., Perez-Ortin J.E.
Yeast 19:1261-1276(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: FUNCTION.
[4]"Global analysis of protein expression in yeast."
Ghaemmaghami S., Huh W.-K., Bower K., Howson R.W., Belle A., Dephoure N., O'Shea E.K., Weissman J.S.
Nature 425:737-741(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
D50617 Genomic DNA. Translation: BAA09181.1.
BK006940 Genomic DNA. Translation: DAA12380.1.
PIRS56195.
RefSeqNP_116595.1. NM_001179907.1.

3D structure databases

ProteinModelPortalP43544.
SMRP43544. Positions 3-203.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

BioGrid31087. 5 interactions.
DIPDIP-1645N.
IntActP43544. 5 interactions.
MINTMINT-386883.
STRING4932.YFL060C.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblFungiYFL060C; YFL060C; YFL060C.
GeneID850484.
KEGGsce:YFL060C.

Organism-specific databases

CYGDYFL060c.
SGDS000001834. SNO3.

Phylogenomic databases

GeneTreeENSGT00390000011516.
HOGENOMHOG000039949.
KOK08681.
OMACAGLIYI.
OrthoDBEOG7BW0W3.

Enzyme and pathway databases

BioCycYEAST:G3O-30407-MONOMER.

Gene expression databases

GenevestigatorP43544.

Family and domain databases

Gene3D3.40.50.880. 1 hit.
InterProIPR029062. Class_I_gatase-like.
IPR002161. Glutamine_amidoTferase_suPdxT.
IPR021196. PdxT/SNO_CS.
[Graphical view]
PfamPF01174. SNO. 1 hit.
[Graphical view]
PIRSFPIRSF005639. Glut_amidoT_SNO. 1 hit.
SUPFAMSSF52317. SSF52317. 1 hit.
TIGRFAMsTIGR03800. PLP_synth_Pdx2. 1 hit.
PROSITEPS01236. PDXT_SNO_1. 1 hit.
PS51130. PDXT_SNO_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio966146.

Entry information

Entry nameSNO3_YEAST
AccessionPrimary (citable) accession number: P43544
Secondary accession number(s): D6VTH0
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: November 1, 1995
Last modified: June 11, 2014
This is version 102 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Relevant documents

Yeast chromosome VI

Yeast (Saccharomyces cerevisiae) chromosome VI: entries and gene names

Yeast

Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD

SIMILARITY comments

Index of protein domains and families