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P43521 (YDEF_THETH) Reviewed, UniProtKB/Swiss-Prot

Last modified April 3, 2013. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
YbbR-like domain-containing protein in def 5'region
OrganismThermus thermophilus
Taxonomic identifier274 [NCBI]
Taxonomic lineageBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus

Protein attributes

Sequence length149 AA.
Sequence statusFragment.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 1 YbbR-like domain.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain‹1 – 149›149YbbR-like domain-containing protein in def 5'region
PRO_0000066191

Regions

Domain1 – 6868YbbR-like

Experimental info

Non-terminal residue11

Sequences

Sequence LengthMass (Da)Tools
P43521 [UniParc].

Last modified November 1, 1995. Version 1.
Checksum: 93975BE435B501C1

FASTA14915,753
        10         20         30         40         50         60 
IPVEVLAQGA WVLTDPAFVE AVGPESQVEA AVSAVGLDLG DEVVLFPLGP EGPLEGVELR 

        70         80         90        100        110        120 
PNRVRVVERR EALFLKEVPL SLNPPPGRRL LDYAPKTVRL VGPREALEGL AGVTATLQEA 

       130        140 
LGPGEVEVAV APDLPPGSIP WDRFGCGLR 

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References

[1]"Characterization of the Thermus thermophilus locus encoding peptide deformylase and methionyl-tRNA(fMet) formyltransferase."
Meinnel T., Blanquet S.
J. Bacteriol. 176:7387-7390(1994) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: VK1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
X79087 Genomic DNA. Translation: CAA55694.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING262724.TTC1661.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

ProtoNetSearch...

Entry information

Entry nameYDEF_THETH
AccessionPrimary (citable) accession number: P43521
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: November 1, 1995
Last modified: April 3, 2013
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families