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Protein

YbbR-like domain-containing protein in def 5'region

Gene
N/A
Organism
Thermus thermophilus
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Recommended name:
YbbR-like domain-containing protein in def 5'region
OrganismiThermus thermophilus
Taxonomic identifieri274 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini‹1 – 149›149YbbR-like domain-containing protein in def 5'regionPRO_0000066191Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi262724.TTC1661.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini1 – 6868YbbR-likeAdd
BLAST

Sequence similaritiesi

Contains 1 YbbR-like domain.Curated

Sequencei

Sequence statusi: Fragment.

P43521-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
IPVEVLAQGA WVLTDPAFVE AVGPESQVEA AVSAVGLDLG DEVVLFPLGP
60 70 80 90 100
EGPLEGVELR PNRVRVVERR EALFLKEVPL SLNPPPGRRL LDYAPKTVRL
110 120 130 140
VGPREALEGL AGVTATLQEA LGPGEVEVAV APDLPPGSIP WDRFGCGLR
Length:149
Mass (Da):15,753
Last modified:November 1, 1995 - v1
Checksum:i93975BE435B501C1
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X79087 Genomic DNA. Translation: CAA55694.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X79087 Genomic DNA. Translation: CAA55694.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi262724.TTC1661.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

ProtoNetiSearch...

Publicationsi

  1. "Characterization of the Thermus thermophilus locus encoding peptide deformylase and methionyl-tRNA(fMet) formyltransferase."
    Meinnel T., Blanquet S.
    J. Bacteriol. 176:7387-7390(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: VK1.

Entry informationi

Entry nameiYDEF_THETH
AccessioniPrimary (citable) accession number: P43521
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: November 1, 1995
Last modified: October 1, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.