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P43435 (NTPD_ENTHA) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 76. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
V-type sodium ATPase subunit D
Alternative name(s):
Na(+)-translocating ATPase subunit D
V-type sodium pump subunit D
Gene names
Name:ntpD
Ordered Locus Names:EHR_08270
OrganismEnterococcus hirae (strain ATCC 9790 / DSM 20160 / JCM 8729 / LMG 6399 / NBRC 3181 / NCIMB 6459 / NCDO 1258) [Complete proteome] [HAMAP]
Taxonomic identifier768486 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliLactobacillalesEnterococcaceaeEnterococcus

Protein attributes

Sequence length210 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Involved in ATP-driven sodium extrusion. Ref.1

Sequence similarities

Belongs to the V-ATPase D subunit family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 210210V-type sodium ATPase subunit D HAMAP-Rule MF_00271
PRO_0000144275

Experimental info

Sequence conflict201 – 21010IKVKNMGTEE → SQSEKYGNRRVRLIQFSILM AFFMIRTNRI in BAA04277. Ref.1

Secondary structure

............... 210
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
P43435 [UniParc].

Last modified January 9, 2013. Version 2.
Checksum: 6779016F1921BC85

FASTA21024,566
        10         20         30         40         50         60 
MRLNVNPTRM ELTRLKKQLT TATRGHKLLK DKQDELMRQF ILLIRKNNEL RQAIEKETQT 

        70         80         90        100        110        120 
AMKDFVLAKS TVEEAFIDEL LALPAENVSI SVVEKNIMSV KVPLMNFQYD ETLNETPLEY 

       130        140        150        160        170        180 
GYLHSNAELD RSIDGFTQLL PKLLKLAEVE KTCQLMAEEI EKTRRRVNAL EYMTIPQLEE 

       190        200        210 
TIYYIKMKLE ENERAEVTRL IKVKNMGTEE 

« Hide

References

« Hide 'large scale' references
[1]"Sequencing and characterization of the ntp gene cluster for vacuolar-type Na(+)-translocating ATPase of Enterococcus hirae."
Takase K., Kakinuma S., Yamato I., Konishi K., Igarashi K., Kakinuma Y.
J. Biol. Chem. 269:11037-11044(1994) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], PROTEIN SEQUENCE OF 1-14, FUNCTION.
Strain: ATCC 9790 / DSM 20160 / JCM 8729 / LMG 6399 / NBRC 3181 / NCIMB 6459 / NCDO 1258.
[2]"Genome sequence of Enterococcus hirae (Streptococcus faecalis) ATCC 9790, a model organism for the study of ion transport, bioenergetics, and copper homeostasis."
Gaechter T., Wunderlin C., Schmidheini T., Solioz M.
J. Bacteriol. 194:5126-5127(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 9790 / DSM 20160 / JCM 8729 / LMG 6399 / NBRC 3181 / NCIMB 6459 / NCDO 1258.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
D17462 Genomic DNA. Translation: BAA04277.1.
CP003504 Genomic DNA. Translation: AFM70581.1.
PIRF53610.
RefSeqYP_006487472.1. NC_018081.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3AONX-ray2.00A1-210[»]
3VR4X-ray2.17G1-210[»]
3VR5X-ray3.90G1-210[»]
3VR6X-ray2.68G1-210[»]
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

DIPDIP-59796N.

Protein family/group databases

TCDB3.A.2.2.2. the h(+)- or na(+)-translocating f-type, v-type and a-type atpase (f-atpase) superfamily.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFM70581; AFM70581; EHR_08270.
GeneID13177595.
KEGGehr:EHR_08270.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK02120.

Enzyme and pathway databases

BioCycMetaCyc:MONOMER-14149.

Family and domain databases

HAMAPMF_00271. ATP_synth_D_arch.
InterProIPR002699. V_ATPase_D.
[Graphical view]
PANTHERPTHR11671. PTHR11671. 1 hit.
PfamPF01813. ATP-synt_D. 1 hit.
[Graphical view]
TIGRFAMsTIGR00309. V_ATPase_subD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameNTPD_ENTHA
AccessionPrimary (citable) accession number: P43435
Secondary accession number(s): I6T729
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: January 9, 2013
Last modified: April 16, 2014
This is version 76 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PDB cross-references

Index of Protein Data Bank (PDB) cross-references