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P43418

- T2G1_AVIPA

UniProt

P43418 - T2G1_AVIPA

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Protein

Type-2 restriction enzyme HgAI

Gene

hgaIR

Organism
Avibacterium paragallinarum (Haemophilus gallinarum)
Status
Reviewed - Annotation score: 2 out of 5- Protein predictedi

Functioni

Recognizes the double-stranded sequences GACGC and GCGTC and cleaves respectively 10 bases after G-1 and 10 bases before G'-1.

Catalytic activityi

Endonucleolytic cleavage of DNA to give specific double-stranded fragments with terminal 5'-phosphates.

GO - Molecular functioni

  1. Type II site-specific deoxyribonuclease activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA restriction-modification system Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Endonuclease, Hydrolase, Nuclease

Keywords - Biological processi

Restriction system

Names & Taxonomyi

Protein namesi
Recommended name:
Type-2 restriction enzyme HgAI (EC:3.1.21.4)
Short name:
R.HgAI
Alternative name(s):
Endonuclease HgAI
Type II restriction enzyme HgAI
Gene namesi
Name:hgaIR
OrganismiAvibacterium paragallinarum (Haemophilus gallinarum)
Taxonomic identifieri728 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeAvibacterium

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 488488Type-2 restriction enzyme HgAIPRO_0000077309Add
BLAST

Family & Domainsi

Family and domain databases

InterProiIPR018573. Restrct_endonuc_II_AlwI.
[Graphical view]
PfamiPF09491. RE_AlwI. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P43418-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MEKILMLNDD QIWIFKKHTN NIQLLIEVAL YLKSNKSSVS KKDKDAMYDI
60 70 80 90 100
FSESELYNPR ESLRDKPLDT INHKLDGLSY FMFGYSDRIN DENKFIFSPL
110 120 130 140 150
GNLFLKYLHD KDKLSKIFSC MLISMQFPHP YSKPSECFLL YPFRLIFKLL
160 170 180 190 200
LDKRLQGRLY HYEVYKIIIH TISIDEAKYE FLVKSILNSR KKSWNEKLNE
210 220 230 240 250
LSEIQHKVVK SVYEWQYYIV PLLGSLHIFK INNGDIEQKL YHPQKDGSKS
260 270 280 290 300
PPTARKANNG YVEINDNLTN FIDKLLNKYS FLDTPILLSD SQRKSNDVTK
310 320 330 340 350
EIYSFYPELL LAEIGETISF ESHILNIPKL ITEYSKNPDN STSGKFEKIL
360 370 380 390 400
EEAFNLFIDV EAQWLAGAGR TDIECMYLPI NEKFSIEAKS TKNKLSMINS
410 420 430 440 450
GRLKRHRTLI SANYTIVITP RYVPSVRYDI EAQDIVLITA DTLAEYLYNN
460 470 480
IISNNRDISY ADIQAIIVAN LGKDISTQIS NLTLSKFG
Length:488
Mass (Da):56,737
Last modified:November 1, 1995 - v1
Checksum:iB5E05259E3C710D2
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
D17388 Genomic DNA. Translation: BAA04208.1.
PIRiC59240.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
D17388 Genomic DNA. Translation: BAA04208.1 .
PIRi C59240.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Family and domain databases

InterProi IPR018573. Restrct_endonuc_II_AlwI.
[Graphical view ]
Pfami PF09491. RE_AlwI. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Nucleotide sequence of the gene of HgaI restriction endonuclease."
    Sugisaki H.
    Bull. Inst. Chem. Res., Kyoto Univ. 71:338-342(1993)
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: NCTC 3438.

Entry informationi

Entry nameiT2G1_AVIPA
AccessioniPrimary (citable) accession number: P43418
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: November 1, 1995
Last modified: April 16, 2014
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Documents

  1. Restriction enzymes and methylases
    Classification of restriction enzymes and methylases and list of entries

External Data

Dasty 3