Reviewed,
UniProtKB/Swiss-Prot P43355 (MAGA1_HUMAN)
Last modified
March 2, 2010.
Version 86.
History...
Clusters with 100%,
90%,
50% identity |
Documents (6) |
Third-party data |
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Names and origin
| Protein names | Recommended name: Melanoma-associated antigen 1 Alternative name(s): MAGE-1 antigen Antigen MZ2-E Cancer/testis antigen 1.1 Short name=CT1.1 | ||||
| Gene names |
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| Organism | Homo sapiens (Human) [Complete proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 309 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Function | Not known, though may play a role in embryonal development and tumor transformation or aspects of tumor progression. Antigen recognized on a melanoma by autologous cytolytic T-lymphocytes. |
| Subcellular location | |
| Tissue specificity | Expressed in many tumors of several types, such as melanoma, head and neck squamous cell carcinoma, lung carcinoma and breast carcinoma, but not in normal tissues except for testes. Never expressed in kidney tumors, leukemias and lymphomas. |
| Sequence similarities | Contains 1 MAGE domain. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Cytoplasm |
| Coding sequence diversity | Polymorphism |
| Molecular function | Tumor antigen |
| Technical term | 3D-structure Complete proteome |
| Gene Ontology (GO) | |
| Cellular component | cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell plasma membrane Ref.1Traceable author statement. Source: ProtInc |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 309 | 309 | Melanoma-associated antigen 1 | PRO_0000156701 | |||||
Regions | |||||||||
| Domain | 102 – 301 | 200 | MAGE | ||||||
| Compositional bias | 33 – 36 | 4 | Poly-Ser | ||||||
Natural variations | |||||||||
| Natural variant | 32 | 1 | T → A Probable polymorphism. dbSNP rs2008160. Ref.5 Ref.6 Ref.8 | VAR_004283 | |||||
| Natural variant | 63 | 1 | A → T: dbSNP rs2233044. | VAR_053491 | |||||
| Natural variant | 72 | 1 | R → Q: dbSNP rs2008144. | VAR_011737 | |||||
| Natural variant | 278 | 1 | K → T in a breast cancer sample; somatic mutation. Ref.12 | VAR_036581 | |||||
Experimental info | |||||||||
| Mutagenesis | 163 | 1 | D → A: Abolishes HLA-A1 binding. | ||||||
| Mutagenesis | 169 | 1 | Y → A: Abolishes HLA-A1 binding. | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "A gene encoding an antigen recognized by cytolytic T lymphocytes on a human melanoma." van der Bruggen P., Traversari C., Chomez P., Lurquin C., De Plaen E., van den Eynde B., Knuth A., Boon T. Science 254:1643-1647(1991) [PubMed: 1840703] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. |
| [2] | "Cloning and analysis of MAGE-1-related genes." Ding M., Beck R.J., Keller C.J., Fenton R.G. Biochem. Biophys. Res. Commun. 202:549-555(1994) [PubMed: 8037761] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA]. Tissue: Skin. |
| [3] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed: 14702039] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Testis. |
| [4] | "Comparative genome sequence analysis of the Bpa/Str region in mouse and man." Mallon A.-M., Platzer M., Bate R., Gloeckner G., Botcherby M.R.M., Nordsiek G., Strivens M.A., Kioschis P., Dangel A., Cunningham D., Straw R.N.A., Weston P., Gilbert M., Fernando S., Goodall K., Hunter G., Greystrong J.S., Clarke D. Brown S.D.M.Genome Res. 10:758-775(2000) [PubMed: 10854409] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [5] | "The polymorphism of MAGE-1 gene in Chinese people." Chen H., Wang L., Mei M., Qin L., Cong X., Xu J., Wei L., Wang Y., Chen W. Submitted (SEP-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [MRNA], VARIANT ALA-32. |
| [6] | "Cloning of human full-length CDSs in BD Creator(TM) system donor vector." Kalnine N., Chen X., Rolfs A., Halleck A., Hines L., Eisenstein S., Koundinya M., Raphael J., Moreira D., Kelley T., LaBaer J., Lin Y., Phelan M., Farmer A. Submitted (AUG-2003) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], VARIANT ALA-32. |
| [7] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [8] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], VARIANT ALA-32. Tissue: Skin. |
| [9] | "Human gene MAGE-3 codes for an antigen recognized on a melanoma by autologous cytolytic T lymphocytes." Gaugler B., van den Eynde B., van der Bruggen P., Romero P., Gaforio J.J., De Plaen E., Lethe B.G., Brasseur F., Boon T. J. Exp. Med. 179:921-930(1994) [PubMed: 8113684] [Abstract] Cited for: MUTAGENESIS. Tissue: Blood. |
| [10] | "MAGE-1 gene product is a cytoplasmic protein." Schultz-Thater E., Juretic A., Dellabona P., Luscher U., Siegrist W., Harder F., Heberer M., Zuber M., Spagnoli G.C. Int. J. Cancer 59:435-439(1994) [PubMed: 7927954] [Abstract] Cited for: SUBCELLULAR LOCATION. |
| [11] | Colinge J., Superti-Furga G., Bennett K.L. Submitted (OCT-2008) to UniProtKB Cited for: IDENTIFICATION [LARGE SCALE ANALYSIS], MASS SPECTROMETRY. |
| [12] | "The consensus coding sequences of human breast and colorectal cancers." Sjoeblom T., Jones S., Wood L.D., Parsons D.W., Lin J., Barber T.D., Mandelker D., Leary R.J., Ptak J., Silliman N., Szabo S., Buckhaults P., Farrell C., Meeh P., Markowitz S.D., Willis J., Dawson D., Willson J.K.V. Velculescu V.E.Science 314:268-274(2006) [PubMed: 16959974] [Abstract] Cited for: VARIANT [LARGE SCALE ANALYSIS] THR-278. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EMBL GenBank DDBJ | M77481 Genomic DNA. Translation: AAA03229.1. AK314979 mRNA. Translation: BAG37478.1. U82670 Genomic DNA. No translation available. AY148486 mRNA. Translation: AAN62752.1. BT009789 mRNA. Translation: AAP88791.1. CH471172 Genomic DNA. Translation: EAW72885.1. BC017555 mRNA. Translation: AAH17555.1. | ||||||||||||||||||
| IPI | IPI00301082. | ||||||||||||||||||
| PIR | JC2358. | ||||||||||||||||||
| RefSeq | NP_004979.3. | ||||||||||||||||||
| UniGene | Hs.72879 | ||||||||||||||||||
3D structure databases | |||||||||||||||||||
| PDBe RCSB PDB PDBj |
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| ModBase | Search... | ||||||||||||||||||
Protein-protein interaction databases | |||||||||||||||||||
| IntAct | P43355. 5 interactions. | ||||||||||||||||||
| STRING | P43355. | ||||||||||||||||||
PTM databases | |||||||||||||||||||
| PhosphoSite | P43355. | ||||||||||||||||||
Proteomic databases | |||||||||||||||||||
| PRIDE | P43355. | ||||||||||||||||||
Genome annotation databases | |||||||||||||||||||
| Ensembl | ENST00000356661; ENSP00000349085; ENSG00000198681; Homo sapiens. [Genome view] | ||||||||||||||||||
| GeneID | 4100. | ||||||||||||||||||
| KEGG | hsa:4100. | ||||||||||||||||||
| UCSC | uc004fhf.2. human. | ||||||||||||||||||
Organism-specific databases | |||||||||||||||||||
| CTD | 4100. | ||||||||||||||||||
| GeneCards | GC0XM152134. | ||||||||||||||||||
| HGNC | HGNC:6796. MAGEA1. | ||||||||||||||||||
| HPA | CAB002620. | ||||||||||||||||||
| MIM | 300016. gene. | ||||||||||||||||||
| PharmGKB | PA30542. | ||||||||||||||||||
| GenAtlas | Search... | ||||||||||||||||||
Phylogenomic databases | |||||||||||||||||||
| eggNOG | prNOG10888. | ||||||||||||||||||
| HOGENOM | HBG507249. | ||||||||||||||||||
| HOVERGEN | HBG006315. | ||||||||||||||||||
| InParanoid | P43355. | ||||||||||||||||||
| OMA | FPTTINF. | ||||||||||||||||||
| OrthoDB | EOG90S310. | ||||||||||||||||||
| PhylomeDB | P43355. | ||||||||||||||||||
Gene expression databases | |||||||||||||||||||
| ArrayExpress | P43355. | ||||||||||||||||||
| Bgee | P43355. | ||||||||||||||||||
| CleanEx | HS_MAGEA1. | ||||||||||||||||||
| Genevestigator | P43355. | ||||||||||||||||||
| GermOnline | ENSG00000198681. Homo sapiens. | ||||||||||||||||||
Family and domain databases | |||||||||||||||||||
| InterPro | IPR002190. MAGE. IPR021072. Melanoma_ass_antigen_N. [Graphical view] | ||||||||||||||||||
| PANTHER | PTHR11736. MAGE. 1 hit. | ||||||||||||||||||
| Pfam | PF01454. MAGE. 1 hit. PF12440. MAGE_N. 1 hit. [Graphical view] | ||||||||||||||||||
| PROSITE | PS50838. MAGE. 1 hit. [Graphical view] | ||||||||||||||||||
| ProtoNet | Search... | ||||||||||||||||||
Other Resources | |||||||||||||||||||
| NextBio | 16080. | ||||||||||||||||||
| SOURCE | Search... | ||||||||||||||||||
Entry information
| Entry name | MAGA1_HUMAN | ||||||||
| Accession | Primary (citable) accession number: P43355 Secondary accession number(s): B2RC81, O00346 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HPI (Human Proteome Initiative) | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome X Human chromosome X: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| PDB cross-references Index of Protein Data Bank (PDB) cross-references |
| SIMILARITY comments Index of protein domains and families |

Clusters with


