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Protein

Uncharacterized protein YpjD

Gene

ypjD

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciBSUB:BSU22500-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YpjD
Gene namesi
Name:ypjD
Synonyms:jojD
Ordered Locus Names:BSU22500
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000497041 – 111Uncharacterized protein YpjDAdd BLAST111

Proteomic databases

PaxDbiP42979
PRIDEiP42979

Interactioni

Subunit structurei

Homodimer, or homotetramer.Curated

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100012366

Structurei

Secondary structure

1111
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi6 – 17Combined sources12
Beta strandi20 – 22Combined sources3
Helixi27 – 48Combined sources22
Beta strandi50 – 52Combined sources3
Helixi62 – 79Combined sources18
Turni80 – 82Combined sources3
Helixi85 – 95Combined sources11

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2GTAX-ray2.90A/B/C/D1-111[»]
ProteinModelPortaliP42979
SMRiP42979
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP42979

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4108ZPQ Bacteria
COG1694 LUCA
HOGENOMiHOG000041924
InParanoidiP42979
OMAiADVLWVL
PhylomeDBiP42979

Family and domain databases

CDDicd11531 NTP-PPase_BsYpjD, 1 hit
InterProiView protein in InterPro
IPR012359 MazG-related_YpjD
IPR004518 MazG_cat
PANTHERiPTHR42692:SF1 PTHR42692:SF1, 1 hit
PfamiView protein in Pfam
PF03819 MazG, 1 hit
PIRSFiPIRSF029904 UCP029904_pph, 1 hit

Sequencei

Sequence statusi: Complete.

P42979-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSDKTMKDIQ AEVDRYIGQF KEGYFSPLAM MARLTEELGE LAREVNHRYG
60 70 80 90 100
EKPKKATEDD KSMEEEIGDV LFVLVCLANS LDISLEEAHD RVMHKFNTRD
110
KDRWTRKEEG K
Length:111
Mass (Da):12,971
Last modified:November 1, 1995 - v1
Checksum:i95C48372A4A6451B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L38424 Genomic DNA Translation: AAA92873.1
L47709 Genomic DNA Translation: AAB38441.1
AL009126 Genomic DNA Translation: CAB14166.1
PIRiD69937
RefSeqiNP_390131.1, NC_000964.3
WP_004398996.1, NZ_JNCM01000036.1

Genome annotation databases

EnsemblBacteriaiCAB14166; CAB14166; BSU22500
GeneIDi939022
KEGGibsu:BSU22500
PATRICifig|224308.179.peg.2454

Similar proteinsi

Entry informationi

Entry nameiYPJD_BACSU
AccessioniPrimary (citable) accession number: P42979
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: November 1, 1995
Last modified: May 23, 2018
This is version 103 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

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