Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

P42947

- YJK7_YEAST

UniProt

P42947 - YJK7_YEAST

Protein

Uncharacterized UPF0442 protein YJL107C

Gene

YJL107C

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 86 (01 Oct 2014)
      Sequence version 1 (01 Nov 1995)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Enzyme and pathway databases

    BioCyciYEAST:G3O-31561-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Uncharacterized UPF0442 protein YJL107C
    Gene namesi
    Ordered Locus Names:YJL107C
    ORF Names:J0813
    OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
    Taxonomic identifieri559292 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
    ProteomesiUP000002311: Chromosome X

    Organism-specific databases

    CYGDiYJL107c.
    SGDiS000003643. YJL107C.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 387387Uncharacterized UPF0442 protein YJL107CPRO_0000203046Add
    BLAST

    Proteomic databases

    PaxDbiP42947.

    Expressioni

    Gene expression databases

    GenevestigatoriP42947.

    Interactioni

    Binary interactionsi

    WithEntry#Exp.IntActNotes
    TIF1P100811EBI-26023,EBI-9017

    Protein-protein interaction databases

    BioGridi33649. 12 interactions.
    DIPiDIP-5095N.
    MINTiMINT-573900.
    STRINGi4932.YJL107C.

    Structurei

    3D structure databases

    ProteinModelPortaliP42947.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the UPF0442 family.Curated

    Phylogenomic databases

    eggNOGiCOG2966.
    OMAiIPSENEN.
    OrthoDBiEOG7CCC0Q.

    Family and domain databases

    InterProiIPR010619. DUF1212.
    [Graphical view]
    PfamiPF06738. DUF1212. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P42947-1 [UniParc]FASTAAdd to Basket

    « Hide

    MDGRNEKPTT PVSDFRVGSS EQSQAGVNLE DSSDHRTSNS AESKKGNLSG    50
    KSISDLGISN NDNKNVRFTA DTDALENDLS SRSTETSDNS KGTDGQDEED 100
    RPARHKRKPK VSFTHLRNNG KDGDDETFIK KIINNLTGNQ GGLVPGLAPI 150
    PSENENGKND IEKNNRNEEI PLSDLADASK IVDVHEGDDK EKLEALKLEG 200
    DVNCTSDGET LGSSSKNSFL APAVDHFDDY AENNSSDDNE GFIETSTYVP 250
    PPSQVKSGVL GSLLKLYQNE DQNSSSIFSD SQAVTTDDEG ISSTAGNKDV 300
    PVAKRSRLQN LKGKAKKGRM PRLKKRLKTE AKITVHIADI LQRHRFILRM 350
    CRALMMYGAP THRLEEYMVM TSRVLEIDGQ FCIFQVV 387
    Length:387
    Mass (Da):42,508
    Last modified:November 1, 1995 - v1
    Checksum:iD7659D1955F5677F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X85021 Genomic DNA. Translation: CAA59387.1.
    Z49383 Genomic DNA. Translation: CAA89403.1.
    AY557885 Genomic DNA. Translation: AAS56211.1.
    AY227895 Genomic DNA. No translation available.
    BK006943 Genomic DNA. Translation: DAA08693.1.
    PIRiS53380.
    RefSeqiNP_012428.1. NM_001181540.1.

    Genome annotation databases

    EnsemblFungiiYJL107C; YJL107C; YJL107C.
    GeneIDi853337.
    KEGGisce:YJL107C.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X85021 Genomic DNA. Translation: CAA59387.1 .
    Z49383 Genomic DNA. Translation: CAA89403.1 .
    AY557885 Genomic DNA. Translation: AAS56211.1 .
    AY227895 Genomic DNA. No translation available.
    BK006943 Genomic DNA. Translation: DAA08693.1 .
    PIRi S53380.
    RefSeqi NP_012428.1. NM_001181540.1.

    3D structure databases

    ProteinModelPortali P42947.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    BioGridi 33649. 12 interactions.
    DIPi DIP-5095N.
    MINTi MINT-573900.
    STRINGi 4932.YJL107C.

    Proteomic databases

    PaxDbi P42947.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblFungii YJL107C ; YJL107C ; YJL107C .
    GeneIDi 853337.
    KEGGi sce:YJL107C.

    Organism-specific databases

    CYGDi YJL107c.
    SGDi S000003643. YJL107C.

    Phylogenomic databases

    eggNOGi COG2966.
    OMAi IPSENEN.
    OrthoDBi EOG7CCC0Q.

    Enzyme and pathway databases

    BioCyci YEAST:G3O-31561-MONOMER.

    Miscellaneous databases

    NextBioi 973715.

    Gene expression databases

    Genevestigatori P42947.

    Family and domain databases

    InterProi IPR010619. DUF1212.
    [Graphical view ]
    Pfami PF06738. DUF1212. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "A 37.5 kb region of yeast chromosome X includes the SME1, MEF2, GSH1 and CSD3 genes, a TCP-1-related gene, an open reading frame similar to the DAL80 gene, and a tRNA(Arg)."
      Rasmussen S.W.
      Yeast 11:873-883(1995) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: ATCC 96604 / S288c / FY1679.
    2. "Complete nucleotide sequence of Saccharomyces cerevisiae chromosome X."
      Galibert F., Alexandraki D., Baur A., Boles E., Chalwatzis N., Chuat J.-C., Coster F., Cziepluch C., de Haan M., Domdey H., Durand P., Entian K.-D., Gatius M., Goffeau A., Grivell L.A., Hennemann A., Herbert C.J., Heumann K.
      , Hilger F., Hollenberg C.P., Huang M.-E., Jacq C., Jauniaux J.-C., Katsoulou C., Kirchrath L., Kleine K., Kordes E., Koetter P., Liebl S., Louis E.J., Manus V., Mewes H.-W., Miosga T., Obermaier B., Perea J., Pohl T.M., Portetelle D., Pujol A., Purnelle B., Ramezani Rad M., Rasmussen S.W., Rose M., Rossau R., Schaaff-Gerstenschlaeger I., Smits P.H.M., Scarcez T., Soriano N., To Van D., Tzermia M., Van Broekhoven A., Vandenbol M., Wedler H., von Wettstein D., Wambutt R., Zagulski M., Zollner A., Karpfinger-Hartl L.
      EMBO J. 15:2031-2049(1996) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 204508 / S288c.
    3. Cited for: GENOME REANNOTATION.
      Strain: ATCC 204508 / S288c.
    4. Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: ATCC 204508 / S288c.
    5. "Reinvestigation of the Saccharomyces cerevisiae genome annotation by comparison to the genome of a related fungus: Ashbya gossypii."
      Brachat S., Dietrich F.S., Voegeli S., Zhang Z., Stuart L., Lerch A., Gates K., Gaffney T.D., Philippsen P.
      Genome Biol. 4:R45.1-R45.13(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 360-387, CONFIRMATION OF FRAMESHIFT.
      Strain: ATCC 204511 / S288c / AB972.
    6. "Organization of specific genomic regions of Zygosaccharomyces rouxii and Pichia sorbitophila: comparison with Saccharomyces cerevisiae."
      Sychrova H., Braun V., Potier S., Souciet J.L.
      Yeast 16:1377-1385(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: CONFIRMATION OF FRAMESHIFT.
      Strain: ATCC 204508 / S288c and ATCC 28383 / FL100 / VTT C-80102.
    7. Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].

    Entry informationi

    Entry nameiYJK7_YEAST
    AccessioniPrimary (citable) accession number: P42947
    Secondary accession number(s): D6VW77
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 1, 1995
    Last sequence update: November 1, 1995
    Last modified: October 1, 2014
    This is version 86 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programFungal Protein Annotation Program

    Miscellaneousi

    Miscellaneous

    Present with 1480 molecules/cell in log phase SD medium.1 Publication

    Caution

    This is a truncated version of an UPF0442 family protein. Strain S288c has a frameshift in position 382, which disrupts the gene coding for this protein and produces two ORFs YJL107C and YJL108C. A contiguous sequence for a S.cerevisiae UPF0442 family protein can be found in strain YJM789 (AC A6ZQL9).Curated

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families
    2. Uncharacterized protein families (UPF)
      List of uncharacterized protein family (UPF) entries
    3. Yeast
      Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
    4. Yeast chromosome X
      Yeast (Saccharomyces cerevisiae) chromosome X: entries and gene names

    External Data

    Dasty 3