P42944 (GZF3_YEAST) Reviewed, UniProtKB/Swiss-Prot
Last modified
April 3, 2013.
Version 105.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Protein GZF3 | ||||||
| Gene names |
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| Organism | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) [Reference proteome] | ||||||
| Taxonomic identifier | 559292 [NCBI] | ||||||
| Taxonomic lineage | Eukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Saccharomycetaceae › Saccharomyces › ![]() |
Protein attributes
| Sequence length | 551 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Subcellular location | Nucleus Potential. |
| Miscellaneous | Present with 319 molecules/cell in log phase SD medium. |
| Sequence similarities | Contains 1 GATA-type zinc finger. |
Ontologies
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 551 | 551 | Protein GZF3 | PRO_0000083488 | |||||
Regions | |||||||||
| Zinc finger | 131 – 155 | 25 | GATA-type | ||||||
Amino acid modifications | |||||||||
| Modified residue | 403 | 1 | Phosphoserine Ref.6 | ||||||
| Modified residue | 404 | 1 | Phosphoserine Ref.6 | ||||||
| Modified residue | 443 | 1 | Phosphothreonine Ref.6 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "A 37.5 kb region of yeast chromosome X includes the SME1, MEF2, GSH1 and CSD3 genes, a TCP-1-related gene, an open reading frame similar to the DAL80 gene, and a tRNA(Arg)." Rasmussen S.W. Yeast 11:873-883(1995) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Strain: ATCC 96604 / S288c / FY1679. |
| [2] | "Sequencing analysis of a 40.2 kb fragment of yeast chromosome X reveals 19 open reading frames including URA2 (5' end), TRK1, PBS2, SPT10, GCD14, RPE1, PHO86, NCA3, ASF1, CCT7, GZF3, two tRNA genes, three remnant delta elements and a Ty4 transposon." Cziepluch C., Kordes E., Pujol A., Jauniaux J.-C. Yeast 12:1471-1474(1996) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Strain: ATCC 96604 / S288c / FY1679. |
| [3] | "Complete nucleotide sequence of Saccharomyces cerevisiae chromosome X." Galibert F., Alexandraki D., Baur A., Boles E., Chalwatzis N., Chuat J.-C., Coster F., Cziepluch C., de Haan M., Domdey H., Durand P., Entian K.-D., Gatius M., Goffeau A., Grivell L.A., Hennemann A., Herbert C.J., Heumann K. Karpfinger-Hartl L.EMBO J. 15:2031-2049(1996) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 204508 / S288c. |
| [4] | Saccharomyces Genome Database Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: ATCC 204508 / S288c. |
| [5] | "Global analysis of protein expression in yeast." Ghaemmaghami S., Huh W.-K., Bower K., Howson R.W., Belle A., Dephoure N., O'Shea E.K., Weissman J.S. Nature 425:737-741(2003) [PubMed] [Europe PMC] [Abstract] Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS]. |
| [6] | "A multidimensional chromatography technology for in-depth phosphoproteome analysis." Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H. Mol. Cell. Proteomics 7:1389-1396(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-403; SER-404 AND THR-443, MASS SPECTROMETRY. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | X85021 Genomic DNA. Translation: CAA59384.1. Z49385 Genomic DNA. Translation: CAA89405.1. X86353 Genomic DNA. Translation: CAA60126.1. BK006943 Genomic DNA. Translation: DAA08690.1. |
| PIR | S53377. |
| RefSeq | NP_012425.1. NM_001181543.1. |
3D structure databases | |
| ProteinModelPortal | P42944. |
| SMR | P42944. Positions 131-182. |
| ModBase | Search... |
Protein-protein interaction databases | |
| DIP | DIP-1359N. |
| IntAct | P42944. 9 interactions. |
| MINT | MINT-387429. |
| STRING | 4932.YJL110C. |
Proteomic databases | |
| PaxDb | P42944. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblFungi | YJL110C; YJL110C; YJL110C. |
| GeneID | 853334. |
| KEGG | sce:YJL110C. |
Organism-specific databases | |
| CYGD | YJL110c. |
| SGD | S000003646. GZF3. |
Phylogenomic databases | |
| eggNOG | COG5641. |
| GeneTree | ENSGT00550000074470. |
| KO | K09184. |
| OrthoDB | EOG4KWP2H. |
Gene expression databases | |
| Genevestigator | P42944. |
| GermOnline | YJL110C. Saccharomyces cerevisiae. |
Family and domain databases | |
| Gene3D | 3.30.50.10. 1 hit. |
| InterPro | IPR000679. Znf_GATA. IPR013088. Znf_NHR/GATA. [Graphical view] |
| Pfam | PF00320. GATA. 1 hit. [Graphical view] |
| PRINTS | PR00619. GATAZNFINGER. |
| SMART | SM00401. ZnF_GATA. 1 hit. [Graphical view] |
| PROSITE | PS00344. GATA_ZN_FINGER_1. 1 hit. PS50114. GATA_ZN_FINGER_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| NextBio | 973706. |
Entry information
| Entry name | GZF3_YEAST | ||||||||
| Accession | Primary (citable) accession number: P42944 Secondary accession number(s): D6VW74 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Fungal Protein Annotation Program | ||||||||
Relevant documents
| Yeast Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD |
| Yeast chromosome X Yeast (Saccharomyces cerevisiae) chromosome X: entries and gene names |
| SIMILARITY comments Index of protein domains and families |

Clusters with
