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P42840

- YN60_YEAST

UniProt

P42840 - YN60_YEAST

Protein

Uncharacterized membrane protein YNL320W

Gene

YNL320W

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 92 (01 Oct 2014)
      Sequence version 1 (01 Nov 1995)
      Previous versions | rss
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    Functioni

    Enzyme and pathway databases

    BioCyciYEAST:G3O-33305-MONOMER.

    Protein family/group databases

    MEROPSiS09.A35.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Uncharacterized membrane protein YNL320W
    Gene namesi
    Ordered Locus Names:YNL320W
    ORF Names:N0342
    OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
    Taxonomic identifieri559292 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
    ProteomesiUP000002311: Chromosome XIV

    Organism-specific databases

    CYGDiYNL320w.
    SGDiS000005264. YNL320W.

    Subcellular locationi

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW

    Keywords - Cellular componenti

    Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 284284Uncharacterized membrane protein YNL320WPRO_0000203364Add
    BLAST

    Proteomic databases

    MaxQBiP42840.
    PaxDbiP42840.
    PeptideAtlasiP42840.

    Expressioni

    Gene expression databases

    GenevestigatoriP42840.

    Interactioni

    Protein-protein interaction databases

    BioGridi35520. 5 interactions.
    DIPiDIP-4158N.
    IntActiP42840. 1 interaction.
    MINTiMINT-540401.
    STRINGi4932.YNL320W.

    Structurei

    3D structure databases

    ProteinModelPortaliP42840.
    ModBaseiSearch...
    MobiDBiSearch...

    Topological domain

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Topological domaini1 – 88CytoplasmicSequence Analysis
    Topological domaini26 – 8055ExtracellularSequence AnalysisAdd
    BLAST
    Topological domaini102 – 284183CytoplasmicSequence AnalysisAdd
    BLAST

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei9 – 2517HelicalSequence AnalysisAdd
    BLAST
    Transmembranei81 – 10121HelicalSequence AnalysisAdd
    BLAST

    Family & Domainsi

    Sequence similaritiesi

    To S.pombe bem46 and M.tuberculosis Rv2307c.Curated

    Keywords - Domaini

    Transmembrane, Transmembrane helix

    Phylogenomic databases

    eggNOGiCOG1073.
    GeneTreeiENSGT00390000000948.
    HOGENOMiHOG000007143.
    KOiK06889.
    OMAiPEGTHND.
    OrthoDBiEOG7FZ097.

    Family and domain databases

    Gene3Di3.40.50.1820. 1 hit.
    InterProiIPR029058. AB_hydrolase.
    IPR029059. AB_hydrolase_5.
    [Graphical view]
    PfamiPF12695. Abhydrolase_5. 1 hit.
    [Graphical view]
    SUPFAMiSSF53474. SSF53474. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    P42840-1 [UniParc]FASTAAdd to Basket

    « Hide

    MLWKVSKMFL GGLVALTTIS VATLYHYQNR LVYPSWAQGA RNHVDTPDSR    50
    GIPYEKLTLI TQDHIKLEAW DIKNENSTST VLILCPNAGN IGYFILIIDI 100
    FYRQFGMSVF IYSYRGYGNS EGSPSEKGLK LDADCVISHL STDSFHSKRK 150
    LVLYGRSLGG ANALYIASKF RDLCDGVILE NTFLSIRKVI PYIFPLLKRF 200
    TLLCHEIWNS EGLMGSCSSE TPFLFLSGLK DEIVPPFHMR KLYETCPSSN 250
    KKIFEFPLGS HNDTIIQDGY WDIIRDFLIE KGFI 284
    Length:284
    Mass (Da):32,308
    Last modified:November 1, 1995 - v1
    Checksum:i933B35169A9CCCDA
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Z46259 Genomic DNA. Translation: CAA86377.1.
    Z71596 Genomic DNA. Translation: CAA96251.1.
    BK006947 Genomic DNA. Translation: DAA10242.1.
    PIRiS51294.
    RefSeqiNP_014079.1. NM_001183158.1.

    Genome annotation databases

    EnsemblFungiiYNL320W; YNL320W; YNL320W.
    GeneIDi855396.
    KEGGisce:YNL320W.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Z46259 Genomic DNA. Translation: CAA86377.1 .
    Z71596 Genomic DNA. Translation: CAA96251.1 .
    BK006947 Genomic DNA. Translation: DAA10242.1 .
    PIRi S51294.
    RefSeqi NP_014079.1. NM_001183158.1.

    3D structure databases

    ProteinModelPortali P42840.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    BioGridi 35520. 5 interactions.
    DIPi DIP-4158N.
    IntActi P42840. 1 interaction.
    MINTi MINT-540401.
    STRINGi 4932.YNL320W.

    Protein family/group databases

    MEROPSi S09.A35.

    Proteomic databases

    MaxQBi P42840.
    PaxDbi P42840.
    PeptideAtlasi P42840.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblFungii YNL320W ; YNL320W ; YNL320W .
    GeneIDi 855396.
    KEGGi sce:YNL320W.

    Organism-specific databases

    CYGDi YNL320w.
    SGDi S000005264. YNL320W.

    Phylogenomic databases

    eggNOGi COG1073.
    GeneTreei ENSGT00390000000948.
    HOGENOMi HOG000007143.
    KOi K06889.
    OMAi PEGTHND.
    OrthoDBi EOG7FZ097.

    Enzyme and pathway databases

    BioCyci YEAST:G3O-33305-MONOMER.

    Miscellaneous databases

    NextBioi 979214.
    PROi P42840.

    Gene expression databases

    Genevestigatori P42840.

    Family and domain databases

    Gene3Di 3.40.50.1820. 1 hit.
    InterProi IPR029058. AB_hydrolase.
    IPR029059. AB_hydrolase_5.
    [Graphical view ]
    Pfami PF12695. Abhydrolase_5. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53474. SSF53474. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Sequencing analysis of a 24.7 kb fragment of yeast chromosome XIV identifies six known genes, a new member of the hexose transporter family and ten new open reading frames."
      Maftahi M., Nicaud J.-M., Levesque H., Gaillardin C.
      Yeast 11:1077-1085(1995) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: S288c / FY1676.
    2. "The nucleotide sequence of Saccharomyces cerevisiae chromosome XIV and its evolutionary implications."
      Philippsen P., Kleine K., Poehlmann R., Duesterhoeft A., Hamberg K., Hegemann J.H., Obermaier B., Urrestarazu L.A., Aert R., Albermann K., Altmann R., Andre B., Baladron V., Ballesta J.P.G., Becam A.-M., Beinhauer J.D., Boskovic J., Buitrago M.J.
      , Bussereau F., Coster F., Crouzet M., D'Angelo M., Dal Pero F., De Antoni A., del Rey F., Doignon F., Domdey H., Dubois E., Fiedler T.A., Fleig U., Floeth M., Fritz C., Gaillardin C., Garcia-Cantalejo J.M., Glansdorff N., Goffeau A., Gueldener U., Herbert C.J., Heumann K., Heuss-Neitzel D., Hilbert H., Hinni K., Iraqui Houssaini I., Jacquet M., Jimenez A., Jonniaux J.-L., Karpfinger-Hartl L., Lanfranchi G., Lepingle A., Levesque H., Lyck R., Maftahi M., Mallet L., Maurer C.T.C., Messenguy F., Mewes H.-W., Moestl D., Nasr F., Nicaud J.-M., Niedenthal R.K., Pandolfo D., Pierard A., Piravandi E., Planta R.J., Pohl T.M., Purnelle B., Rebischung C., Remacha M.A., Revuelta J.L., Rinke M., Saiz J.E., Sartorello F., Scherens B., Sen-Gupta M., Soler-Mira A., Urbanus J.H.M., Valle G., Van Dyck L., Verhasselt P., Vierendeels F., Vissers S., Voet M., Volckaert G., Wach A., Wambutt R., Wedler H., Zollner A., Hani J.
      Nature 387:93-98(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 204508 / S288c.
    3. Cited for: GENOME REANNOTATION.
      Strain: ATCC 204508 / S288c.
    4. Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
    5. "A global topology map of the Saccharomyces cerevisiae membrane proteome."
      Kim H., Melen K., Oesterberg M., von Heijne G.
      Proc. Natl. Acad. Sci. U.S.A. 103:11142-11147(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: TOPOLOGY [LARGE SCALE ANALYSIS].
      Strain: ATCC 208353 / W303-1A.

    Entry informationi

    Entry nameiYN60_YEAST
    AccessioniPrimary (citable) accession number: P42840
    Secondary accession number(s): D6W0M6
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 1, 1995
    Last sequence update: November 1, 1995
    Last modified: October 1, 2014
    This is version 92 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programFungal Protein Annotation Program

    Miscellaneousi

    Miscellaneous

    Present with 259 molecules/cell in log phase SD medium.1 Publication

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Yeast
      Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
    2. Yeast chromosome XIV
      Yeast (Saccharomyces cerevisiae) chromosome XIV: entries and gene names

    External Data

    Dasty 3