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P42840

- YN60_YEAST

UniProt

P42840 - YN60_YEAST

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Protein
Uncharacterized membrane protein YNL320W
Gene
YNL320W, N0342
Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciYEAST:G3O-33305-MONOMER.

Protein family/group databases

MEROPSiS09.A35.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized membrane protein YNL320W
Gene namesi
Ordered Locus Names:YNL320W
ORF Names:N0342
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
ProteomesiUP000002311: Chromosome XIV

Organism-specific databases

CYGDiYNL320w.
SGDiS000005264. YNL320W.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini1 – 88Cytoplasmic Reviewed prediction
Transmembranei9 – 2517Helical; Reviewed prediction
Add
BLAST
Topological domaini26 – 8055Extracellular Reviewed prediction
Add
BLAST
Transmembranei81 – 10121Helical; Reviewed prediction
Add
BLAST
Topological domaini102 – 284183Cytoplasmic Reviewed prediction
Add
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 284284Uncharacterized membrane protein YNL320W
PRO_0000203364Add
BLAST

Proteomic databases

MaxQBiP42840.
PaxDbiP42840.
PeptideAtlasiP42840.

Expressioni

Gene expression databases

GenevestigatoriP42840.

Interactioni

Protein-protein interaction databases

BioGridi35520. 5 interactions.
DIPiDIP-4158N.
IntActiP42840. 1 interaction.
MINTiMINT-540401.
STRINGi4932.YNL320W.

Structurei

3D structure databases

ProteinModelPortaliP42840.

Family & Domainsi

Sequence similaritiesi

To S.pombe bem46 and M.tuberculosis Rv2307c.

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiCOG1073.
GeneTreeiENSGT00390000000948.
HOGENOMiHOG000007143.
KOiK06889.
OMAiPEGTHND.
OrthoDBiEOG7FZ097.

Family and domain databases

Gene3Di3.40.50.1820. 1 hit.
InterProiIPR029058. AB_hydrolase.
IPR029059. AB_hydrolase_5.
[Graphical view]
PfamiPF12695. Abhydrolase_5. 1 hit.
[Graphical view]
SUPFAMiSSF53474. SSF53474. 1 hit.

Sequencei

Sequence statusi: Complete.

P42840-1 [UniParc]FASTAAdd to Basket

« Hide

MLWKVSKMFL GGLVALTTIS VATLYHYQNR LVYPSWAQGA RNHVDTPDSR    50
GIPYEKLTLI TQDHIKLEAW DIKNENSTST VLILCPNAGN IGYFILIIDI 100
FYRQFGMSVF IYSYRGYGNS EGSPSEKGLK LDADCVISHL STDSFHSKRK 150
LVLYGRSLGG ANALYIASKF RDLCDGVILE NTFLSIRKVI PYIFPLLKRF 200
TLLCHEIWNS EGLMGSCSSE TPFLFLSGLK DEIVPPFHMR KLYETCPSSN 250
KKIFEFPLGS HNDTIIQDGY WDIIRDFLIE KGFI 284
Length:284
Mass (Da):32,308
Last modified:November 1, 1995 - v1
Checksum:i933B35169A9CCCDA
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
Z46259 Genomic DNA. Translation: CAA86377.1.
Z71596 Genomic DNA. Translation: CAA96251.1.
BK006947 Genomic DNA. Translation: DAA10242.1.
PIRiS51294.
RefSeqiNP_014079.1. NM_001183158.1.

Genome annotation databases

EnsemblFungiiYNL320W; YNL320W; YNL320W.
GeneIDi855396.
KEGGisce:YNL320W.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
Z46259 Genomic DNA. Translation: CAA86377.1 .
Z71596 Genomic DNA. Translation: CAA96251.1 .
BK006947 Genomic DNA. Translation: DAA10242.1 .
PIRi S51294.
RefSeqi NP_014079.1. NM_001183158.1.

3D structure databases

ProteinModelPortali P42840.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 35520. 5 interactions.
DIPi DIP-4158N.
IntActi P42840. 1 interaction.
MINTi MINT-540401.
STRINGi 4932.YNL320W.

Protein family/group databases

MEROPSi S09.A35.

Proteomic databases

MaxQBi P42840.
PaxDbi P42840.
PeptideAtlasi P42840.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblFungii YNL320W ; YNL320W ; YNL320W .
GeneIDi 855396.
KEGGi sce:YNL320W.

Organism-specific databases

CYGDi YNL320w.
SGDi S000005264. YNL320W.

Phylogenomic databases

eggNOGi COG1073.
GeneTreei ENSGT00390000000948.
HOGENOMi HOG000007143.
KOi K06889.
OMAi PEGTHND.
OrthoDBi EOG7FZ097.

Enzyme and pathway databases

BioCyci YEAST:G3O-33305-MONOMER.

Miscellaneous databases

NextBioi 979214.
PROi P42840.

Gene expression databases

Genevestigatori P42840.

Family and domain databases

Gene3Di 3.40.50.1820. 1 hit.
InterProi IPR029058. AB_hydrolase.
IPR029059. AB_hydrolase_5.
[Graphical view ]
Pfami PF12695. Abhydrolase_5. 1 hit.
[Graphical view ]
SUPFAMi SSF53474. SSF53474. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Sequencing analysis of a 24.7 kb fragment of yeast chromosome XIV identifies six known genes, a new member of the hexose transporter family and ten new open reading frames."
    Maftahi M., Nicaud J.-M., Levesque H., Gaillardin C.
    Yeast 11:1077-1085(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: S288c / FY1676.
  2. "The nucleotide sequence of Saccharomyces cerevisiae chromosome XIV and its evolutionary implications."
    Philippsen P., Kleine K., Poehlmann R., Duesterhoeft A., Hamberg K., Hegemann J.H., Obermaier B., Urrestarazu L.A., Aert R., Albermann K., Altmann R., Andre B., Baladron V., Ballesta J.P.G., Becam A.-M., Beinhauer J.D., Boskovic J., Buitrago M.J.
    , Bussereau F., Coster F., Crouzet M., D'Angelo M., Dal Pero F., De Antoni A., del Rey F., Doignon F., Domdey H., Dubois E., Fiedler T.A., Fleig U., Floeth M., Fritz C., Gaillardin C., Garcia-Cantalejo J.M., Glansdorff N., Goffeau A., Gueldener U., Herbert C.J., Heumann K., Heuss-Neitzel D., Hilbert H., Hinni K., Iraqui Houssaini I., Jacquet M., Jimenez A., Jonniaux J.-L., Karpfinger-Hartl L., Lanfranchi G., Lepingle A., Levesque H., Lyck R., Maftahi M., Mallet L., Maurer C.T.C., Messenguy F., Mewes H.-W., Moestl D., Nasr F., Nicaud J.-M., Niedenthal R.K., Pandolfo D., Pierard A., Piravandi E., Planta R.J., Pohl T.M., Purnelle B., Rebischung C., Remacha M.A., Revuelta J.L., Rinke M., Saiz J.E., Sartorello F., Scherens B., Sen-Gupta M., Soler-Mira A., Urbanus J.H.M., Valle G., Van Dyck L., Verhasselt P., Vierendeels F., Vissers S., Voet M., Volckaert G., Wach A., Wambutt R., Wedler H., Zollner A., Hani J.
    Nature 387:93-98(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  3. Cited for: GENOME REANNOTATION.
    Strain: ATCC 204508 / S288c.
  4. Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
  5. "A global topology map of the Saccharomyces cerevisiae membrane proteome."
    Kim H., Melen K., Oesterberg M., von Heijne G.
    Proc. Natl. Acad. Sci. U.S.A. 103:11142-11147(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: TOPOLOGY [LARGE SCALE ANALYSIS].
    Strain: ATCC 208353 / W303-1A.

Entry informationi

Entry nameiYN60_YEAST
AccessioniPrimary (citable) accession number: P42840
Secondary accession number(s): D6W0M6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: November 1, 1995
Last modified: June 11, 2014
This is version 91 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Miscellaneous

Present with 259 molecules/cell in log phase SD medium.

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  2. Yeast chromosome XIV
    Yeast (Saccharomyces cerevisiae) chromosome XIV: entries and gene names

External Data

Dasty 3

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