P42701 (I12R1_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 136.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Interleukin-12 receptor subunit beta-1 Short name=IL-12 receptor subunit beta-1 Short name=IL-12R subunit beta-1 Short name=IL-12R-beta-1 Short name=IL-12RB1 Alternative name(s): IL-12 receptor beta component CD_antigen=CD212 | ||||
| Gene names |
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| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 662 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Functions as an interleukin receptor which binds interleukin-12 with low affinity and is involved in IL12 transduction. Associated with IL12RB2 it forms a functional, high affinity receptor for IL12. Associates also with IL23R to form the interleukin-23 receptor which functions in IL23 signal transduction probably through activation of the Jak-Stat signaling cascade. Ref.9 |
| Subunit structure | Dimer or oligomer; disulfide-linked. Interacts with IL12RB2 to form the high affinity IL12 receptor. Heterodimer with IL23R; in presence of IL23. The heterodimer forms the IL23 receptor. Ref.8 Ref.9 |
| Subcellular location | |
| Domain | The WSXWS motif appears to be necessary for proper protein folding and thereby efficient intracellular transport and cell-surface receptor binding. The box 1 motif is required for JAK interaction and/or activation. |
| Involvement in disease | Mendelian susceptibility to mycobacterial disease (MSMD) [MIM:209950]: This rare condition confers predisposition to illness caused by moderately virulent mycobacterial species, such as Bacillus Calmette-Guerin (BCG) vaccine and environmental non-tuberculous mycobacteria, and by the more virulent Mycobacterium tuberculosis. Other microorganisms rarely cause severe clinical disease in individuals with susceptibility to mycobacterial infections, with the exception of Salmonella which infects less than 50% of these individuals. The pathogenic mechanism underlying MSMD is the impairment of interferon-gamma mediated immunity, whose severity determines the clinical outcome. Some patients die of overwhelming mycobacterial disease with lepromatous-like lesions in early childhood, whereas others develop, later in life, disseminated but curable infections with tuberculoid granulomas. MSMD is a genetically heterogeneous disease with autosomal recessive, autosomal dominant or X-linked inheritance. |
| Sequence similarities | Belongs to the type I cytokine receptor family. Type 2 subfamily. Contains 5 fibronectin type-III domains. |
Ontologies
Alternative products
| This entry describes 3 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: P42701-1) Also known as: Long; This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: P42701-2) Also known as: Short; The sequence of this isoform differs from the canonical sequence as follows: 659-662: KAKM → DR | ||||||
| Isoform 3 (identifier: P42701-3) The sequence of this isoform differs from the canonical sequence as follows: 341-422: EPVALNISVG...CYYITIFASA → DGMISAHCNL...CHHTRLILYF 423-662: Missing. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||||
Molecule processing | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Signal peptide | 1 – 23 | 23 | Potential | ||||||||
| Chain | 24 – 662 | 639 | Interleukin-12 receptor subunit beta-1 | PRO_0000010917 | |||||||
Regions | |||||||||||
| Topological domain | 24 – 545 | 522 | Extracellular Potential | ||||||||
| Transmembrane | 546 – 570 | 25 | Helical; Potential | ||||||||
| Topological domain | 571 – 662 | 92 | Cytoplasmic Potential | ||||||||
| Domain | 43 – 133 | 91 | Fibronectin type-III 1 | ||||||||
| Domain | 143 – 236 | 94 | Fibronectin type-III 2 | ||||||||
| Domain | 237 – 337 | 101 | Fibronectin type-III 3 | ||||||||
| Domain | 338 – 444 | 107 | Fibronectin type-III 4 | ||||||||
| Domain | 445 – 539 | 95 | Fibronectin type-III 5 | ||||||||
| Motif | 222 – 226 | 5 | WSXWS motif | ||||||||
| Motif | 577 – 585 | 9 | Box 1 motif | ||||||||
Amino acid modifications | |||||||||||
| Glycosylation | 121 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 329 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 346 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 352 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 442 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 456 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Disulfide bond | 52 ↔ 62 | By similarity | |||||||||
Natural variations | |||||||||||
| Alternative sequence | 341 – 422 | 82 | EPVAL…IFASA → DGMISAHCNLRLPDSRDSPA SASRVAGITGICHHTRLILY F in isoform 3. | VSP_037043 | |||||||
| Alternative sequence | 423 – 662 | 240 | Missing in isoform 3. | VSP_037044 | |||||||
| Alternative sequence | 659 – 662 | 4 | KAKM → DR in isoform 2. | VSP_001715 | |||||||
| Natural variant | 3 | 1 | P → Q. Ref.3 Corresponds to variant rs17884651 [ dbSNP | Ensembl ]. | VAR_021281 | |||||||
| Natural variant | 47 | 1 | P → S. Ref.3 Corresponds to variant rs17887176 [ dbSNP | Ensembl ]. | VAR_021282 | |||||||
| Natural variant | 156 | 1 | R → H. Ref.3 Corresponds to variant rs11575926 [ dbSNP | Ensembl ]. | VAR_021283 | |||||||
| Natural variant | 213 | 1 | R → W in MSMD. Ref.10 | VAR_015577 | |||||||
| Natural variant | 214 | 1 | Q → R. Ref.3 Ref.7 Corresponds to variant rs11575934 [ dbSNP | Ensembl ]. | VAR_021284 | |||||||
| Natural variant | 339 | 1 | H → Q. Ref.3 Corresponds to variant rs17884957 [ dbSNP | Ensembl ]. | VAR_021285 | |||||||
| Natural variant | 365 | 1 | M → T. Ref.3 Corresponds to variant rs375947 [ dbSNP | Ensembl ]. | VAR_011986 | |||||||
| Natural variant | 378 | 1 | G → R. Ref.3 Corresponds to variant rs401502 [ dbSNP | Ensembl ]. | VAR_011987 | |||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Expression cloning of a human IL-12 receptor component. A new member of the cytokine receptor superfamily with strong homology to gp130." Chua A.O., Chizzonite R., Desai B.B., Truitt T.P., Nunes P., Minetti L.J., Warrier R.R., Presky D.H., Levine J.F., Gately M.K., Gubler U. J. Immunol. 153:128-136(1994) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 1 AND 2). |
| [2] | "Genomic structure of IL12RB1 gene." Elloumi-Zghal H., Abdelhak S., Dellagi K. Submitted (SEP-2000) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. |
| [3] | SeattleSNPs variation discovery resource Submitted (OCT-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], VARIANTS GLN-3; SER-47; HIS-156; ARG-214; GLN-339; THR-365 AND ARG-378. |
| [4] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 3). Tissue: Umbilical cord blood. |
| [5] | "The DNA sequence and biology of human chromosome 19." Grimwood J., Gordon L.A., Olsen A.S., Terry A., Schmutz J., Lamerdin J.E., Hellsten U., Goodstein D., Couronne O., Tran-Gyamfi M., Aerts A., Altherr M., Ashworth L., Bajorek E., Black S., Branscomb E., Caenepeel S., Carrano A.V. Lucas S.M.Nature 428:529-535(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [6] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [7] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1; 2 AND 3), VARIANT ARG-214. Tissue: Colon and Testis. |
| [8] | "A functional interleukin 12 receptor complex is composed of two beta-type cytokine receptor subunits." Presky D.H., Yang H., Minetti L.J., Chua A.O., Nabavi N., Wu C.-Y., Gately M.K., Gubler U. Proc. Natl. Acad. Sci. U.S.A. 93:14002-14007(1996) [PubMed] [Europe PMC] [Abstract] Cited for: SUBUNIT. |
| [9] | "A receptor for the heterodimeric cytokine IL-23 is composed of IL-12Rbeta1 and a novel cytokine receptor subunit, IL-23R." Parham C., Chirica M., Timans J., Vaisberg E., Travis M., Cheung J., Pflanz S., Zhang R., Singh K.P., Vega F., To W., Wagner J., O'Farrell A.-M., McClanahan T.K., Zurawski S., Hannum C., Gorman D., Rennick D.M. Moore K.W.J. Immunol. 168:5699-5708(2002) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION, INTERACTION WITH IL23R. |
| [10] | "Interleukin-12 receptor beta-1 deficiency in a patient with abdominal tuberculosis." Altare F., Ensser A., Breiman A., Reichenbach J., El Baghdadi J., Fischer A., Emile J.-F., Gaillard J.-L., Meinl E., Casanova J.-L. J. Infect. Dis. 184:231-236(2001) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANT MSMD TRP-213. |
| + | Additional computationally mapped references. |
Web resources
| IL12RB1base IL12RB1 mutation db |
| GeneReviews |
| SeattleSNPs |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | U03187 mRNA. Translation: AAA21340.1. AJ297688 AJ297701 Genomic DNA. Translation: CAC10446.1.AY771996 Genomic DNA. Translation: AAV28734.1. AK290423 mRNA. Translation: BAF83112.1. AC020904 Genomic DNA. No translation available. CH471106 Genomic DNA. Translation: EAW84656.1. BC029121 mRNA. Translation: AAH29121.1. BC137404 mRNA. Translation: AAI37405.1. BC137406 mRNA. Translation: AAI37407.1. |
| IPI | IPI00001400. IPI00218703. IPI00297449. |
| PIR | I37892. |
| RefSeq | NP_005526.1. NM_005535.1. NP_714912.1. NM_153701.1. |
| UniGene | Hs.567294. |
3D structure databases | |
| ProteinModelPortal | P42701. |
| ModBase | Search... |
Protein-protein interaction databases | |
| DIP | DIP-3773N. |
| IntAct | P42701. 3 interactions. |
| STRING | 9606.ENSP00000314425. |
PTM databases | |
| PhosphoSite | P42701. |
Polymorphism databases | |
| DMDM | 1170462. |
Proteomic databases | |
| PaxDb | P42701. |
| PRIDE | P42701. |
Protocols and materials databases | |
| DNASU | 3594. |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000322153; ENSP00000314425; ENSG00000096996. ENST00000430026; ENSP00000403103; ENSG00000096996. ENST00000593993; ENSP00000472165; ENSG00000096996. ENST00000600835; ENSP00000470788; ENSG00000096996. |
| GeneID | 3594. |
| KEGG | hsa:3594. |
| UCSC | uc002nhw.1. human. uc002nhy.3. human. uc010xqb.1. human. |
Organism-specific databases | |
| CTD | 3594. |
| GeneCards | GC19M018170. |
| HGNC | HGNC:5971. IL12RB1. |
| MIM | 209950. phenotype. 601604. gene. |
| neXtProt | NX_P42701. |
| Orphanet | 748. Mendelian susceptibility to mycobacterial diseases. 186. Primary biliary cirrhosis. |
| PharmGKB | PA29786. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | NOG42645. |
| HOGENOM | HOG000082476. |
| HOVERGEN | HBG052058. |
| InParanoid | P42701. |
| KO | K05063. |
| OMA | CPGVLKE. |
| OrthoDB | EOG43TZV3. |
Enzyme and pathway databases | |
| Pathway_Interaction_DB | il12_2pathway. IL12-mediated signaling events. il23pathway. IL23-mediated signaling events. il27pathway. IL27-mediated signaling events. |
Gene expression databases | |
| Bgee | P42701. |
| CleanEx | HS_IL12RB1. |
| Genevestigator | P42701. |
| GermOnline | ENSG00000096996. Homo sapiens. |
Family and domain databases | |
| Gene3D | 2.60.40.10. 2 hits. |
| InterPro | IPR003961. Fibronectin_type3. IPR003529. Hematopoietin_rcpt_Gp130_CS. IPR013783. Ig-like_fold. [Graphical view] |
| Pfam | PF00041. fn3. 1 hit. [Graphical view] |
| SMART | SM00060. FN3. 1 hit. [Graphical view] |
| SUPFAM | SSF49265. FN_III-like. 1 hit. |
| PROSITE | PS50853. FN3. 1 hit. PS01353. HEMATOPO_REC_L_F2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| GenomeRNAi | 3594. |
| NextBio | 14043. |
| SOURCE | Search... |
Entry information
| Entry name | I12R1_HUMAN | ||||||||
| Accession | Primary (citable) accession number: P42701 Secondary accession number(s): A8K308 Q8N6Q7 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human cell differentiation molecules CD nomenclature of surface proteins of human leucocytes and list of entries |
| Human chromosome 19 Human chromosome 19: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
