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Protein

Inner membrane protein YgjV

Gene

ygjV

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G7608-MONOMER

Protein family/group databases

TCDBi9.B.221.1.1 the 5 tms ygjv (ygjv) family

Names & Taxonomyi

Protein namesi
Recommended name:
Inner membrane protein YgjV
Gene namesi
Name:ygjV
Ordered Locus Names:b3090, JW3061
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12733 ygjV

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 2PeriplasmicSequence analysis2
Transmembranei3 – 23HelicalSequence analysisAdd BLAST21
Topological domaini24 – 38CytoplasmicSequence analysisAdd BLAST15
Transmembranei39 – 59HelicalSequence analysisAdd BLAST21
Topological domaini60 – 71PeriplasmicSequence analysisAdd BLAST12
Transmembranei72 – 92HelicalSequence analysisAdd BLAST21
Transmembranei93 – 113HelicalSequence analysisAdd BLAST21
Topological domaini114 – 133PeriplasmicSequence analysisAdd BLAST20
Transmembranei134 – 154HelicalSequence analysisAdd BLAST21
Topological domaini155 – 183CytoplasmicSequence analysisAdd BLAST29

GO - Cellular componenti

  • integral component of plasma membrane Source: EcoliWiki
  • plasma membrane Source: EcoCyc

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001694261 – 183Inner membrane protein YgjVAdd BLAST183

Proteomic databases

PaxDbiP42603
PRIDEiP42603

Interactioni

Protein-protein interaction databases

BioGridi4262406, 11 interactors
STRINGi316385.ECDH10B_3266

Structurei

3D structure databases

ProteinModelPortaliP42603
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105P66 Bacteria
ENOG410XT5W LUCA
HOGENOMiHOG000125147
OMAiLFNSFCW

Family and domain databases

InterProiView protein in InterPro
IPR019629 Uncharacterised_HI1736/YgjV
IPR026267 YgjV
PfamiView protein in Pfam
PF10688 Imp-YgjV, 1 hit
PIRSFiPIRSF011443 YgjV, 1 hit

Sequencei

Sequence statusi: Complete.

P42603-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTAYWLAQGV GVIAFLIGIT TFFNRDERRF KKQLSVYSAV IGVHFFLLGT
60 70 80 90 100
YPAGASAILN AIRTLITLRT RSLWVMAIFI VLTGGIGLAK FHHPVELLPV
110 120 130 140 150
IGTIVSTWAL FCCKGLTMRC VMWFSTCCWV IHNFWAGSIG GTMIEGSFLL
160 170 180
MNGLNIIRFW RMQKRGIDPF KVEKTPSAVD ERG
Length:183
Mass (Da):20,512
Last modified:November 1, 1995 - v1
Checksum:iF7D5ECE3820BD821
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D13328 Genomic DNA No translation available.
U18997 Genomic DNA Translation: AAA57892.1
U00096 Genomic DNA Translation: AAC76125.1
AP009048 Genomic DNA Translation: BAE77140.1
PIRiG65097
RefSeqiNP_417561.1, NC_000913.3
WP_000128135.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC76125; AAC76125; b3090
BAE77140; BAE77140; BAE77140
GeneIDi947604
KEGGiecj:JW3061
eco:b3090
PATRICifig|1411691.4.peg.3639

Similar proteinsi

Entry informationi

Entry nameiYGJV_ECOLI
AccessioniPrimary (citable) accession number: P42603
Secondary accession number(s): Q2M9B6
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: November 1, 1995
Last modified: March 28, 2018
This is version 112 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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