Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Uncharacterized protein YgjQ

Gene

ygjQ

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G7605-MONOMER.
ECOL316407:JW3057-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YgjQ
Gene namesi
Name:ygjQ
Ordered Locus Names:b3086, JW3057
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12728. ygjQ.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei18 – 3518HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 230230Uncharacterized protein YgjQPRO_0000169425Add
BLAST

Proteomic databases

PaxDbiP42598.
PRIDEiP42598.

Interactioni

Protein-protein interaction databases

BioGridi4260875. 7 interactions.
IntActiP42598. 8 interactions.
STRINGi511145.b3086.

Structurei

3D structure databases

ProteinModelPortaliP42598.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

To E.coli SanA.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4108UB4. Bacteria.
COG2949. LUCA.
HOGENOMiHOG000031180.
InParanoidiP42598.
OMAiPHFLGPR.
OrthoDBiEOG6WMJ3Z.
PhylomeDBiP42598.

Family and domain databases

Gene3Di3.40.50.620. 1 hit.
InterProiIPR003848. DUF218.
IPR014729. Rossmann-like_a/b/a_fold.
[Graphical view]
PfamiPF02698. DUF218. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P42598-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLRAFARLLL RICFSRRTLK IACLLLLVAG ATILIADRVM VNASKQLTWS
60 70 80 90 100
DVNAVPARNV GLLLGARPGN RYFTRRIDTA AALYHAGKVK WLLVSGDNGR
110 120 130 140 150
KNYDEASGMQ QALIAKGVPA KVIFCDYAGF STLDSVVRAK KVFGENHITI
160 170 180 190 200
ISQEFHNQRA IWLAKQYGID AIGFNAPDLN MKHGFYTQLR EKLARVSAVI
210 220 230
DAKILHRQPK YLGPSVMIGP FSEHGCPAQK
Length:230
Mass (Da):25,480
Last modified:November 1, 1995 - v1
Checksum:i318B854E63507E60
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U18997 Genomic DNA. Translation: AAA57887.1.
U00096 Genomic DNA. Translation: AAC76121.1.
AP009048 Genomic DNA. Translation: BAE77136.1.
PIRiC65097.
RefSeqiNP_417557.1. NC_000913.3.
WP_000942548.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC76121; AAC76121; b3086.
BAE77136; BAE77136; BAE77136.
GeneIDi947598.
KEGGiecj:JW3057.
eco:b3086.
PATRICi32121590. VBIEscCol129921_3181.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U18997 Genomic DNA. Translation: AAA57887.1.
U00096 Genomic DNA. Translation: AAC76121.1.
AP009048 Genomic DNA. Translation: BAE77136.1.
PIRiC65097.
RefSeqiNP_417557.1. NC_000913.3.
WP_000942548.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP42598.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4260875. 7 interactions.
IntActiP42598. 8 interactions.
STRINGi511145.b3086.

Proteomic databases

PaxDbiP42598.
PRIDEiP42598.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC76121; AAC76121; b3086.
BAE77136; BAE77136; BAE77136.
GeneIDi947598.
KEGGiecj:JW3057.
eco:b3086.
PATRICi32121590. VBIEscCol129921_3181.

Organism-specific databases

EchoBASEiEB2587.
EcoGeneiEG12728. ygjQ.

Phylogenomic databases

eggNOGiENOG4108UB4. Bacteria.
COG2949. LUCA.
HOGENOMiHOG000031180.
InParanoidiP42598.
OMAiPHFLGPR.
OrthoDBiEOG6WMJ3Z.
PhylomeDBiP42598.

Enzyme and pathway databases

BioCyciEcoCyc:G7605-MONOMER.
ECOL316407:JW3057-MONOMER.

Miscellaneous databases

PROiP42598.

Family and domain databases

Gene3Di3.40.50.620. 1 hit.
InterProiIPR003848. DUF218.
IPR014729. Rossmann-like_a/b/a_fold.
[Graphical view]
PfamiPF02698. DUF218. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYGJQ_ECOLI
AccessioniPrimary (citable) accession number: P42598
Secondary accession number(s): Q2M9C0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: November 1, 1995
Last modified: January 20, 2016
This is version 99 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.