Skip Header

Contribute Send feedback
Read comments (?) or add your own

P42592 (YGJK_ECOLI) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 77. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized protein ygjK
Gene names
Name:ygjK
Ordered Locus Names:b3080, JW3051
OrganismEscherichia coli (strain K12)
Taxonomic identifier83333 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia

Protein attributes

Sequence length783 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at protein level

Ontologies

Keywords
   DomainSignal
   Technical term3D-structure
Complete proteome
Reference proteome
Gene Ontology (GO)
   Biological processtrehalose metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functionalpha,alpha-trehalase activity

Inferred from electronic annotation. Source: InterPro

glucosidase activity

Inferred from direct assay. Source: EcoCyc

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2222 Potential
Chain23 – 783761Uncharacterized protein ygjK
PRO_0000013906

Secondary structure

1 .......................................................................................................................... 783
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
P42592 [UniParc].

Last modified November 1, 1995. Version 1.
Checksum: AE4C37BFB78EC82B

FASTA78388,321
        10         20         30         40         50         60 
MKIKTILTPV TCALLISFSA HAANADNYKN VINRTGAPQY MKDYDYDDHQ RFNPFFDLGA 

        70         80         90        100        110        120 
WHGHLLPDGP NTMGGFPGVA LLTEEYINFM ASNFDRLTVW QDGKKVDFTL EAYSIPGALV 

       130        140        150        160        170        180 
QKLTAKDVQV EMTLRFATPR TSLLETKITS NKPLDLVWDG ELLEKLEAKE GKPLSDKTIA 

       190        200        210        220        230        240 
GEYPDYQRKI SATRDGLKVT FGKVRATWDL LTSGESEYQV HKSLPVQTEI NGNRFTSKAH 

       250        260        270        280        290        300 
INGSTTLYTT YSHLLTAQEV SKEQMQIRDI LARPAFYLTA SQQRWEEYLK KGLTNPDATP 

       310        320        330        340        350        360 
EQTRVAVKAI ETLNGNWRSP GGAVKFNTVT PSVTGRWFSG NQTWPWDTWK QAFAMAHFNP 

       370        380        390        400        410        420 
DIAKENIRAV FSWQIQPGDS VRPQDVGFVP DLIAWNLSPE RGGDGGNWNE RNTKPSLAAW 

       430        440        450        460        470        480 
SVMEVYNVTQ DKTWVAEMYP KLVAYHDWWL RNRDHNGNGV PEYGATRDKA HNTESGEMLF 

       490        500        510        520        530        540 
TVKKGDKEET QSGLNNYARV VEKGQYDSLE IPAQVAASWE SGRDDAAVFG FIDKEQLDKY 

       550        560        570        580        590        600 
VANGGKRSDW TVKFAENRSQ DGTLLGYSLL QESVDQASYM YSDNHYLAEM ATILGKPEEA 

       610        620        630        640        650        660 
KRYRQLAQQL ADYINTCMFD PTTQFYYDVR IEDKPLANGC AGKPIVERGK GPEGWSPLFN 

       670        680        690        700        710        720 
GAATQANADA VVKVMLDPKE FNTFVPLGTA ALTNPAFGAD IYWRGRVWVD QFWFGLKGME 

       730        740        750        760        770        780 
RYGYRDDALK LADTFFRHAK GLTADGPIQE NYNPLTGAQQ GAPNFSWSAA HLYMLYNDFF 


RKQ

« Hide

References

[1]"The complete genome sequence of Escherichia coli K-12."
Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y.
Science 277:1453-1474(1997) [PubMed: 9278503] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / MG1655 / ATCC 47076.
[2]"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
Mol. Syst. Biol. 2:E1-E5(2006) [PubMed: 16738553] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		U18997 Genomic DNA. Translation: AAA57881.1.
U00096 Genomic DNA. Translation: AAC76115.1.
AP009048 Genomic DNA. Translation: BAE77130.1.
PIRE65096.
RefSeqNP_417551.1. NC_000913.2.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3C67X-ray1.90A/B23-783[»]
3C68X-ray1.50A/B23-783[»]
3C69X-ray2.00A/B23-783[»]
3D3IX-ray1.78A/B23-783[»]
ProteinModelPortalP42592.
SMRP42592. Positions 25-782.
ModBaseSearch...

Protein-protein interaction databases

IntActP42592. 5 interactions.

Protein family/group databases

CAZyGH63. Glycoside Hydrolase Family 63.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBESCT00000004689; EBESCP00000004689; EBESCG00000003830.
EBESCT00000016481; EBESCP00000015772; EBESCG00000015541.
GeneID947596.
GenomeReviewsGene locus JW3051 in contig AP009048_GR.
Gene locus b3080 in contig U00096_GR.
KEGGecj:JW3051.
eco:b3080.
PATRIC32121576. VBIEscCol129921_3174.

Organism-specific databases

EchoBASEEB2581.
EcoGeneEG12722. ygjK.

Phylogenomic databases

eggNOGNOG16503.
GeneTreeEBGT00050000010499.
HOGENOMHBG467323.
OMAVAVKAME.
ProtClustDBPRK10137.

Enzyme and pathway databases

BioCycEcoCyc:G7599-MONOMER.
MetaCyc:G7599-MONOMER.

Gene expression databases

GenevestigatorP42592.

Family and domain databases

InterProIPR008928. 6-hairpin_glycosidase-like.
IPR001661. Glyco_hydro_37.
[Graphical view]
KOK03931.
PfamPF01204. Trehalase. 1 hit.
[Graphical view]
SUPFAMSSF48208. Glyco_trans_6hp. 1 hit.
ProtoNetSearch...

Entry information

Entry nameYGJK_ECOLI
AccessionPrimary (citable) accession number: P42592
Secondary accession number(s): Q2M9C6
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: November 1, 1995
Last modified: January 25, 2012
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Escherichia coli

Escherichia coli (strain K12): entries and cross-references to EcoGene

PDB cross-references

Index of Protein Data Bank (PDB) cross-references

to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents