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Protein

Uncharacterized protein YkyB

Gene

ykyB

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciBSUB:BSU14020-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YkyB
Gene namesi
Name:ykyB
Ordered Locus Names:BSU14020
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000001570 Componenti: Chromosome

Organism-specific databases

GenoListiBSU14020.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 154154Uncharacterized protein YkyBPRO_0000049613Add
BLAST

Proteomic databases

PaxDbiP42430.

Interactioni

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100007786.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG29621.
HOGENOMiHOG000096115.
OMAiFTVNRHA.
OrthoDBiEOG6MM1MQ.

Family and domain databases

InterProiIPR025552. YkyB.
[Graphical view]
PfamiPF14177. YkyB. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P42430-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDDHAYTKDL QPTVENLSKA VYTVNRHAKT APNPKYLYLL KKRALQKLVK
60 70 80 90 100
EGKGKKIGLH FSKNPRFSQQ QSDVLISIGD YYFHMPPTKE DFEHLPHLGT
110 120 130 140 150
LNQSYRNPKA QMSLTKAKHL LQEYVGMKEK PLVPNRQQPA YHKPVFKKLG

ESYF
Length:154
Mass (Da):17,896
Last modified:March 27, 2002 - v2
Checksum:iD5CF6D15C3CED6F2
GO

Sequence cautioni

The sequence U05345 differs from that shown. Reason: Frameshift at position 135. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U05345 Unassigned DNA. No translation available.
AJ222587 Genomic DNA. Translation: CAA10865.1.
AL009126 Genomic DNA. Translation: CAB13275.1.
Z29584 Genomic DNA. No translation available.
X68235 Genomic DNA. No translation available.
PIRiE69870.
RefSeqiNP_389285.1. NC_000964.3.
WP_003232406.1. NZ_JNCM01000035.1.

Genome annotation databases

EnsemblBacteriaiCAB13275; CAB13275; BSU14020.
GeneIDi11239274.
939225.
KEGGibsu:BSU14020.
PATRICi18974589. VBIBacSub10457_1486.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U05345 Unassigned DNA. No translation available.
AJ222587 Genomic DNA. Translation: CAA10865.1.
AL009126 Genomic DNA. Translation: CAB13275.1.
Z29584 Genomic DNA. No translation available.
X68235 Genomic DNA. No translation available.
PIRiE69870.
RefSeqiNP_389285.1. NC_000964.3.
WP_003232406.1. NZ_JNCM01000035.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100007786.

Proteomic databases

PaxDbiP42430.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB13275; CAB13275; BSU14020.
GeneIDi11239274.
939225.
KEGGibsu:BSU14020.
PATRICi18974589. VBIBacSub10457_1486.

Organism-specific databases

GenoListiBSU14020.

Phylogenomic databases

eggNOGiNOG29621.
HOGENOMiHOG000096115.
OMAiFTVNRHA.
OrthoDBiEOG6MM1MQ.

Enzyme and pathway databases

BioCyciBSUB:BSU14020-MONOMER.

Family and domain databases

InterProiIPR025552. YkyB.
[Graphical view]
PfamiPF14177. YkyB. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Dual chemotaxis signaling pathways in Bacillus subtilis: a sigma D-dependent gene encodes a novel protein with both CheW and CheY homologous domains."
    Fredrick K.L., Helmann J.D.
    J. Bacteriol. 176:2727-2735(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: 168.
  2. Scanlan E., Devine K.M.
    Submitted (NOV-1997) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: 168.
  3. "The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
    Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V.
    , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
    Nature 390:249-256(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 168.
  4. "Cloning and characterization of heat-inducible promoters of Bacillus subtilis."
    Voelker U., Riethdorf S., Winkler A., Weigend B., Fortnagel P., Hecker M.
    FEMS Microbiol. Lett. 106:287-294(1993) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-9.
    Strain: 168.

Entry informationi

Entry nameiYKYB_BACSU
AccessioniPrimary (citable) accession number: P42430
Secondary accession number(s): O34548
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: March 27, 2002
Last modified: June 24, 2015
This is version 79 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.