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P42430 (YKYB_BACSU) Reviewed, UniProtKB/Swiss-Prot

Last modified November 13, 2013. Version 73. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized protein YkyB
Gene names
Name:ykyB
Ordered Locus Names:BSU14020
OrganismBacillus subtilis (strain 168) [Reference proteome] [HAMAP]
Taxonomic identifier224308 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus

Protein attributes

Sequence length154 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence caution

The sequence U05345 differs from that shown. Reason: Frameshift at position 135.

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 154154Uncharacterized protein YkyB
PRO_0000049613

Sequences

Sequence LengthMass (Da)Tools
P42430 [UniParc].

Last modified March 27, 2002. Version 2.
Checksum: D5CF6D15C3CED6F2

FASTA15417,896
        10         20         30         40         50         60 
MDDHAYTKDL QPTVENLSKA VYTVNRHAKT APNPKYLYLL KKRALQKLVK EGKGKKIGLH 

        70         80         90        100        110        120 
FSKNPRFSQQ QSDVLISIGD YYFHMPPTKE DFEHLPHLGT LNQSYRNPKA QMSLTKAKHL 

       130        140        150 
LQEYVGMKEK PLVPNRQQPA YHKPVFKKLG ESYF 

« Hide

References

« Hide 'large scale' references
[1]"Dual chemotaxis signaling pathways in Bacillus subtilis: a sigma D-dependent gene encodes a novel protein with both CheW and CheY homologous domains."
Fredrick K.L., Helmann J.D.
J. Bacteriol. 176:2727-2735(1994) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: 168.
[2]Scanlan E., Devine K.M.
Submitted (NOV-1997) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: 168.
[3]"The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V. expand/collapse author list , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
Nature 390:249-256(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 168.
[4]"Cloning and characterization of heat-inducible promoters of Bacillus subtilis."
Voelker U., Riethdorf S., Winkler A., Weigend B., Fortnagel P., Hecker M.
FEMS Microbiol. Lett. 106:287-294(1993) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-9.
Strain: 168.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U05345 Unassigned DNA. No translation available.
AJ222587 Genomic DNA. Translation: CAA10865.1.
AL009126 Genomic DNA. Translation: CAB13275.1.
Z29584 Genomic DNA. No translation available.
X68235 Genomic DNA. No translation available.
PIRE69870.
RefSeqNP_389285.1. NC_000964.3.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING224308.BSU14020.

Proteomic databases

PaxDbP42430.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAB13275; CAB13275; BSU14020.
GeneID939225.
KEGGbsu:BSU14020.
PATRIC18974589. VBIBacSub10457_1486.

Organism-specific databases

GenoListBSU14020.

Phylogenomic databases

eggNOGNOG29621.
HOGENOMHOG000096115.
OMAFTVNRHA.
OrthoDBEOG6MM1MQ.
ProtClustDBCLSK887213.

Enzyme and pathway databases

BioCycBSUB:BSU14020-MONOMER.

Family and domain databases

InterProIPR025552. YkyB.
[Graphical view]
PfamPF14177. YkyB. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameYKYB_BACSU
AccessionPrimary (citable) accession number: P42430
Secondary accession number(s): O34548
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: March 27, 2002
Last modified: November 13, 2013
This is version 73 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Bacillus subtilis

Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList