P42356 (PI4KA_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
January 25, 2012.
Version 109.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Phosphatidylinositol 4-kinase alpha Short name=PI4-kinase alpha Short name=PI4K-alpha Short name=PtdIns-4-kinase alpha EC=2.7.1.67 | ||||
| Gene names |
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| Organism | Homo sapiens (Human) | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 2044 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Acts on phosphatidylinositol (PtdIns) in the first committed step in the production of the second messenger inositol-1,4,5,-trisphosphate. |
| Catalytic activity | ATP + 1-phosphatidyl-1D-myo-inositol = ADP + 1-phosphatidyl-1D-myo-inositol 4-phosphate. |
| Enzyme regulation | This is a type II PtdIns-4-kinase activated by detergents such as triton and inhibited by adenosine. |
| Tissue specificity | Expressed ubiquitously. Highest levels in placenta and brain. Little or no expression in lung, liver, pancreas, testis or leukocytes. Ref.1 Ref.2 |
| Sequence similarities | Belongs to the PI3/PI4-kinase family. Type III PI4K subfamily. Contains 1 PI3K/PI4K domain. Contains 1 PIK helical domain. |
Ontologies
| Keywords | |
|---|---|
| Coding sequence diversity | Alternative splicing Polymorphism |
| Ligand | ATP-binding Nucleotide-binding |
| Molecular function | Kinase Transferase |
| PTM | Phosphoprotein |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological process | phosphatidylinositol biosynthetic process Traceable author statement. Source: ProtInc phosphatidylinositol-mediated signalingInferred from electronic annotation. Source: InterPro synaptic transmissionTraceable author statement. Source: ProtInc |
| Cellular component | Golgi-associated vesicle Traceable author statement. Source: ProtInc |
| Molecular function | 1-phosphatidylinositol 4-kinase activity Traceable author statement. Source: ProtInc ATP bindingInferred from electronic annotation. Source: UniProtKB-KW protein bindingInferred from physical interaction. Source: UniProtKB |
| Complete GO annotation... | |
Alternative products
| This entry describes 2 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: P42356-1) Also known as: PI4K230; This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: P42356-2) Also known as: PI4K97; The sequence of this isoform differs from the canonical sequence as follows: 1-1190: Missing. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 2044 | 2044 | Phosphatidylinositol 4-kinase alpha | PRO_0000088827 | |||||
Regions | |||||||||
| Domain | 1472 – 1660 | 189 | PIK helical | ||||||
| Domain | 1788 – 2021 | 234 | PI3K/PI4K | ||||||
| Region | 1661 – 1793 | 133 | Pleckstrin homology (PH) domain conferring phosphoinositide binding specificity By similarity | ||||||
Amino acid modifications | |||||||||
| Modified residue | 172 | 1 | Phosphoserine Ref.5 Ref.9 | ||||||
| Modified residue | 197 | 1 | Phosphothreonine Ref.9 | ||||||
| Modified residue | 198 | 1 | Phosphoserine Ref.5 Ref.6 | ||||||
| Modified residue | 199 | 1 | Phosphoserine Ref.6 | ||||||
| Modified residue | 202 | 1 | Phosphoserine Ref.6 | ||||||
| Modified residue | 204 | 1 | Phosphoserine Ref.6 | ||||||
| Modified residue | 207 | 1 | Phosphoserine Ref.5 Ref.6 Ref.10 | ||||||
| Modified residue | 1096 | 1 | Phosphotyrosine Ref.8 | ||||||
| Modified residue | 1378 | 1 | Phosphoserine Ref.10 | ||||||
| Modified residue | 1770 | 1 | Phosphoserine Ref.7 | ||||||
Natural variations | |||||||||
| Alternative sequence | 1 – 1190 | 1190 | Missing in isoform 2. | VSP_008805 | |||||
| Natural variant | 322 | 1 | M → V. Corresponds to variant rs17819211 [ dbSNP | Ensembl ]. | VAR_050531 | |||||
| Natural variant | 1793 | 1 | V → L. Corresponds to variant rs2539908 [ dbSNP | Ensembl ]. | VAR_059549 | |||||
Experimental info | |||||||||
| Sequence conflict | 380 | 1 | N → S in AAD13352. Ref.2 | ||||||
| Sequence conflict | 1889 | 1 | S → I in AAH53654. Ref.4 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Cloning and characterization of a human phosphatidylinositol 4-kinase." Wong K., Cantley L.C. J. Biol. Chem. 269:28878-28884(1994) [PubMed: 7961848] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 2), TISSUE SPECIFICITY. |
| [2] | "Functional expression and characterisation of a new human phosphatidylinositol 4-kinase PI4K230." Gehrmann T., Guelkan H., Suer S., Herberg F.W., Balla A., Vereb G. Jr., Mayr G.W., Heilmeyer L.M.G. Jr. Biochim. Biophys. Acta 1437:341-356(1999) [PubMed: 10101268] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), TISSUE SPECIFICITY. |
| [3] | "The DNA sequence of human chromosome 22." Dunham I., Hunt A.R., Collins J.E., Bruskiewich R., Beare D.M., Clamp M., Smink L.J., Ainscough R., Almeida J.P., Babbage A.K., Bagguley C., Bailey J., Barlow K.F., Bates K.N., Beasley O.P., Bird C.P., Blakey S.E., Bridgeman A.M. Wright H.Nature 402:489-495(1999) [PubMed: 10591208] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [4] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1142-2044 (ISOFORM 1). Tissue: Uterus. |
| [5] | "Kinase-selective enrichment enables quantitative phosphoproteomics of the kinome across the cell cycle." Daub H., Olsen J.V., Bairlein M., Gnad F., Oppermann F.S., Korner R., Greff Z., Keri G., Stemmann O., Mann M. Mol. Cell 31:438-448(2008) [PubMed: 18691976] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-172; SER-198 AND SER-207, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [6] | "A quantitative atlas of mitotic phosphorylation." Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed: 18669648] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-198; SER-199; SER-202; SER-204 AND SER-207, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [7] | "Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach." Gauci S., Helbig A.O., Slijper M., Krijgsveld J., Heck A.J., Mohammed S. Anal. Chem. 81:4493-4501(2009) [PubMed: 19413330] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1770, MASS SPECTROMETRY. Tissue: Embryonic kidney. |
| [8] | "An extensive survey of tyrosine phosphorylation revealing new sites in human mammary epithelial cells." Heibeck T.H., Ding S.-J., Opresko L.K., Zhao R., Schepmoes A.A., Yang F., Tolmachev A.V., Monroe M.E., Camp D.G. II, Smith R.D., Wiley H.S., Qian W.-J. J. Proteome Res. 8:3852-3861(2009) [PubMed: 19534553] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT TYR-1096, MASS SPECTROMETRY. Tissue: Mammary epithelium. |
| [9] | "Large-scale proteomics analysis of the human kinome." Oppermann F.S., Gnad F., Olsen J.V., Hornberger R., Greff Z., Keri G., Mann M., Daub H. Mol. Cell. Proteomics 8:1751-1764(2009) [PubMed: 19369195] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-172 AND THR-197, MASS SPECTROMETRY. |
| [10] | "Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions." Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K., Rodionov V., Han D.K. Sci. Signal. 2:RA46-RA46(2009) [PubMed: 19690332] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-207 AND SER-1378, MASS SPECTROMETRY. Tissue: Leukemic T-cell. |
| [11] | "Initial characterization of the human central proteome." Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J. BMC Syst. Biol. 5:17-17(2011) [PubMed: 21269460] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | L36151 mRNA. Translation: AAA56839.1. AF012872 mRNA. Translation: AAD13352.1. AC007050 Genomic DNA. No translation available. AC007308 Genomic DNA. No translation available. BC018120 mRNA. Translation: AAH18120.2. BC053654 mRNA. Translation: AAH53654.1. |
| IPI | IPI00031424. IPI00070943. |
| PIR | A55404. |
| RefSeq | NP_002641.1. NM_002650.2. |
| UniGene | Hs.529438. |
3D structure databases | |
| ProteinModelPortal | P42356. |
| SMR | P42356. Positions 1501-2028. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | P42356. 7 interactions. |
| MINT | MINT-1388461. |
| STRING | P42356. |
PTM databases | |
| PhosphoSite | P42356. |
Polymorphism databases | |
| DMDM | 218512114. |
Proteomic databases | |
| PRIDE | P42356. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000255882; ENSP00000255882; ENSG00000241973. |
| GeneID | 5297. |
| KEGG | hsa:5297. |
| UCSC | uc002zsy.2. human. uc002zsz.2. human. |
Organism-specific databases | |
| CTD | 5297. |
| GeneCards | GC22M021061. |
| H-InvDB | HIX0016262. |
| HGNC | HGNC:8983. PI4KA. |
| HPA | CAB009092. |
| MIM | 600286. gene. |
| neXtProt | NX_P42356. |
| PharmGKB | PA162399305. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | prNOG15200. |
| HOVERGEN | HBG052742. |
| InParanoid | P42356. |
| OrthoDB | EOG4FJ87V. |
| PhylomeDB | P42356. |
Enzyme and pathway databases | |
| BioCyc | MetaCyc:ENSG00000133511-MONOMER. |
| Pathway_Interaction_DB | avb3_integrin_pathway. Integrins in angiogenesis. |
Gene expression databases | |
| ArrayExpress | P42356. |
| Bgee | P42356. |
| CleanEx | HS_PI4KA. |
| Genevestigator | P42356. |
| GermOnline | ENSG00000133511. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR016024. ARM-type_fold. IPR011009. Kinase-like_dom. IPR000403. PI3/4_kinase_cat. IPR018936. PI3/4_kinase_CS. IPR015433. PI_Kinase. IPR001263. PInositide-3_kin_accessory_dom. [Graphical view] |
| Gene3D | G3DSA:1.10.1070.11. PI3/4_kinase_cat. 1 hit. G3DSA:1.25.40.70. PI3Ka. 1 hit. |
| KO | K00888. |
| PANTHER | PTHR10048. PI_Kinase. 1 hit. |
| Pfam | PF00454. PI3_PI4_kinase. 1 hit. PF00613. PI3Ka. 1 hit. [Graphical view] |
| SMART | SM00145. PI3Ka. 1 hit. SM00146. PI3Kc. 1 hit. [Graphical view] |
| SUPFAM | SSF48371. ARM-type_fold. 1 hit. SSF56112. Kinase_like. 1 hit. |
| PROSITE | PS00915. PI3_4_KINASE_1. 1 hit. PS00916. PI3_4_KINASE_2. 1 hit. PS50290. PI3_4_KINASE_3. 1 hit. PS51545. PIK_HELICAL. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| NextBio | 20474. |
| SOURCE | Search... |
Entry information
| Entry name | PI4KA_HUMAN | ||||||||
| Accession | Primary (citable) accession number: P42356 Secondary accession number(s): Q7Z625, Q9UPG2 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 22 Human chromosome 22: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with