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P42349 (Y1242_SYNY3) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 84. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized methyltransferase sll1242

EC=2.1.1.-
Alternative name(s):
ORF N
Gene names
Ordered Locus Names:sll1242
OrganismSynechocystis sp. (strain PCC 6803 / Kazusa) [Reference proteome] [HAMAP]
Taxonomic identifier1111708 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis

Protein attributes

Sequence length536 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Cofactor

Binds 1 4Fe-4S cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine Potential.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 536536Uncharacterized methyltransferase sll1242
PRO_0000157884

Sites

Metal binding1771Iron-sulfur (4Fe-4S-S-AdoMet) Potential
Metal binding1811Iron-sulfur (4Fe-4S-S-AdoMet) Potential
Metal binding1841Iron-sulfur (4Fe-4S-S-AdoMet) Potential

Sequences

Sequence LengthMass (Da)Tools
P42349 [UniParc].

Last modified May 30, 2000. Version 2.
Checksum: 715F06F2C2D684E3

FASTA53661,756
        10         20         30         40         50         60 
MRALLIYPLF PPTFWSYEKI LELVGRKVLL PPLGLITVAG ILPQEWEFKL VDRNVRNVTE 

        70         80         90        100        110        120 
AEWDWAEVVI ISGMIVQRDD MVENIKEAKA HGKLVAVGGP FATSVPDEVQ NAGADFLILD 

       130        140        150        160        170        180 
EGEITLPLFV EALERGETAG IIRAQEKPDV TTTPIPRYDL LELDAYDSMS VQFSRGCPFQ 

       190        200        210        220        230        240 
CEFCDIIVLY GRKPRTKEPA QLLRELDYLY ELGWRRSVFM VDDNFIGNKR NVKLLLKELK 

       250        260        270        280        290        300 
VWQEEHQYPF RFNTEASVDL ADDQELMDLM VECYFDAVFL GIETPDEESL EFTKKFQNTR 

       310        320        330        340        350        360 
NSLADSVDKI IKAGLRPMAG FIIGFDGEKQ GAGDRIVRFA EQTAIPTTTF AMLQALPNTA 

       370        380        390        400        410        420 
LWHRLKRENR LLDESKGNIN QTTLMNFIPT RPLEDIANEY VEAFWELYDP HGYLDRNYRC 

       430        440        450        460        470        480 
FLKLGAPKCK TAFKLPNLVD LKALAIVIWR QGVKRDTRFR FWHHAFGILR HNPAVFEHYI 

       490        500        510        520        530 
TLCAHNEHFL QYREIVRQEI GEQLRDYLSR QQQDKVEETV LSPTAIAAET EKVLAS 

« Hide

References

« Hide 'large scale' references
[1]"Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S. expand/collapse author list , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PCC 6803 / Kazusa.
[2]"Structure of a cyanobacterial gene encoding the 50S ribosomal protein L9."
Malakhov M.P., Wada H., Los D.A., Sakamoto T., Murata N.
Plant Mol. Biol. 21:913-918(1993) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 291-536.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BA000022 Genomic DNA. Translation: BAA18175.1.
D10716 Genomic DNA. Translation: BAA38817.1.
PIRS75614.
RefSeqNP_441495.1. NC_000911.1.
YP_005651553.1. NC_017277.1.
YP_007451377.1. NC_020286.1.

3D structure databases

ProteinModelPortalP42349.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING1148.sll1242.

Proteomic databases

PaxDbP42349.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAA18175; BAA18175; BAA18175.
GeneID12254205.
14617037.
954875.
KEGGsyn:sll1242.
syy:SYNGTS_1600.
syz:MYO_116150.
PATRIC23840407. VBISynSp132158_1761.

Phylogenomic databases

eggNOGCOG1032.
OMALYEPNAY.
OrthoDBEOG696BS8.
PhylomeDBP42349.
ProtClustDBCLSK893148.

Family and domain databases

Gene3D3.80.30.20. 1 hit.
InterProIPR006158. Cobalamin-bd.
IPR025274. DUF4070.
IPR006638. Elp3/MiaB/NifB.
IPR023970. MeThioTfrase/rSAM.
IPR007197. rSAM.
IPR023404. rSAM_horseshoe.
[Graphical view]
PANTHERPTHR11918. PTHR11918. 1 hit.
PfamPF02310. B12-binding. 1 hit.
PF13282. DUF4070. 1 hit.
PF04055. Radical_SAM. 1 hit.
[Graphical view]
SMARTSM00729. Elp3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameY1242_SYNY3
AccessionPrimary (citable) accession number: P42349
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: May 30, 2000
Last modified: April 16, 2014
This is version 84 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Synechocystis PCC 6803

Synechocystis (strain PCC 6803): entries and gene names