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Protein

Uncharacterized methyltransferase sll1242

Gene

sll1242

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

Cofactori

[4Fe-4S] clusterCuratedNote: Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.Curated

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi177 – 1771Iron-sulfur (4Fe-4S-S-AdoMet)Sequence Analysis
Metal bindingi181 – 1811Iron-sulfur (4Fe-4S-S-AdoMet)Sequence Analysis
Metal bindingi184 – 1841Iron-sulfur (4Fe-4S-S-AdoMet)Sequence Analysis

GO - Molecular functioni

  1. 4 iron, 4 sulfur cluster binding Source: UniProtKB-KW
  2. cobalamin binding Source: InterPro
  3. metal ion binding Source: UniProtKB-KW
  4. methyltransferase activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Methyltransferase, Transferase

Keywords - Ligandi

4Fe-4S, Iron, Iron-sulfur, Metal-binding, S-adenosyl-L-methionine

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized methyltransferase sll1242 (EC:2.1.1.-)
Alternative name(s):
ORF N
Gene namesi
Ordered Locus Names:sll1242
OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
Taxonomic identifieri1111708 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
ProteomesiUP000001425 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 536536Uncharacterized methyltransferase sll1242PRO_0000157884Add
BLAST

Proteomic databases

PaxDbiP42349.

Interactioni

Protein-protein interaction databases

STRINGi1148.sll1242.

Structurei

3D structure databases

ProteinModelPortaliP42349.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1032.
InParanoidiP42349.
OMAiLYEPNAY.
OrthoDBiEOG696BS8.
PhylomeDBiP42349.

Family and domain databases

Gene3Di3.80.30.20. 1 hit.
InterProiIPR006158. Cobalamin-bd.
IPR025274. DUF4070.
IPR006638. Elp3/MiaB/NifB.
IPR023970. MeThioTfrase/rSAM.
IPR007197. rSAM.
IPR023404. rSAM_horseshoe.
[Graphical view]
PANTHERiPTHR11918. PTHR11918. 1 hit.
PfamiPF02310. B12-binding. 1 hit.
PF13282. DUF4070. 1 hit.
PF04055. Radical_SAM. 1 hit.
[Graphical view]
SMARTiSM00729. Elp3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P42349-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRALLIYPLF PPTFWSYEKI LELVGRKVLL PPLGLITVAG ILPQEWEFKL
60 70 80 90 100
VDRNVRNVTE AEWDWAEVVI ISGMIVQRDD MVENIKEAKA HGKLVAVGGP
110 120 130 140 150
FATSVPDEVQ NAGADFLILD EGEITLPLFV EALERGETAG IIRAQEKPDV
160 170 180 190 200
TTTPIPRYDL LELDAYDSMS VQFSRGCPFQ CEFCDIIVLY GRKPRTKEPA
210 220 230 240 250
QLLRELDYLY ELGWRRSVFM VDDNFIGNKR NVKLLLKELK VWQEEHQYPF
260 270 280 290 300
RFNTEASVDL ADDQELMDLM VECYFDAVFL GIETPDEESL EFTKKFQNTR
310 320 330 340 350
NSLADSVDKI IKAGLRPMAG FIIGFDGEKQ GAGDRIVRFA EQTAIPTTTF
360 370 380 390 400
AMLQALPNTA LWHRLKRENR LLDESKGNIN QTTLMNFIPT RPLEDIANEY
410 420 430 440 450
VEAFWELYDP HGYLDRNYRC FLKLGAPKCK TAFKLPNLVD LKALAIVIWR
460 470 480 490 500
QGVKRDTRFR FWHHAFGILR HNPAVFEHYI TLCAHNEHFL QYREIVRQEI
510 520 530
GEQLRDYLSR QQQDKVEETV LSPTAIAAET EKVLAS
Length:536
Mass (Da):61,756
Last modified:May 30, 2000 - v2
Checksum:i715F06F2C2D684E3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA18175.1.
D10716 Genomic DNA. Translation: BAA38817.1.
PIRiS75614.
RefSeqiNP_441495.1. NC_000911.1.
YP_005651553.1. NC_017277.1.
YP_007451377.1. NC_020286.1.

Genome annotation databases

EnsemblBacteriaiBAA18175; BAA18175; BAA18175.
KEGGisyn:sll1242.
PATRICi23840407. VBISynSp132158_1761.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA18175.1.
D10716 Genomic DNA. Translation: BAA38817.1.
PIRiS75614.
RefSeqiNP_441495.1. NC_000911.1.
YP_005651553.1. NC_017277.1.
YP_007451377.1. NC_020286.1.

3D structure databases

ProteinModelPortaliP42349.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi1148.sll1242.

Proteomic databases

PaxDbiP42349.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAA18175; BAA18175; BAA18175.
KEGGisyn:sll1242.
PATRICi23840407. VBISynSp132158_1761.

Phylogenomic databases

eggNOGiCOG1032.
InParanoidiP42349.
OMAiLYEPNAY.
OrthoDBiEOG696BS8.
PhylomeDBiP42349.

Family and domain databases

Gene3Di3.80.30.20. 1 hit.
InterProiIPR006158. Cobalamin-bd.
IPR025274. DUF4070.
IPR006638. Elp3/MiaB/NifB.
IPR023970. MeThioTfrase/rSAM.
IPR007197. rSAM.
IPR023404. rSAM_horseshoe.
[Graphical view]
PANTHERiPTHR11918. PTHR11918. 1 hit.
PfamiPF02310. B12-binding. 1 hit.
PF13282. DUF4070. 1 hit.
PF04055. Radical_SAM. 1 hit.
[Graphical view]
SMARTiSM00729. Elp3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
    Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
    , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
    DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC 6803 / Kazusa.
  2. "Structure of a cyanobacterial gene encoding the 50S ribosomal protein L9."
    Malakhov M.P., Wada H., Los D.A., Sakamoto T., Murata N.
    Plant Mol. Biol. 21:913-918(1993) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 291-536.

Entry informationi

Entry nameiY1242_SYNY3
AccessioniPrimary (citable) accession number: P42349
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: May 30, 2000
Last modified: April 1, 2015
This is version 91 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Synechocystis PCC 6803
    Synechocystis (strain PCC 6803): entries and gene names

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.