P42226 (STAT6_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 134.
History...
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Signal transducer and activator of transcription 6 Alternative name(s): IL-4 Stat | ||
| Gene names |
| ||
| Organism | Homo sapiens (Human) [Reference proteome] | ||
| Taxonomic identifier | 9606 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 847 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Carries out a dual function: signal transduction and activation of transcription. Involved in interleukin-4 signalling. |
| Subunit structure | Forms a homodimer or a heterodimer with a related family member By similarity. Interacts with NCOA1 via its C-terminal LXXLL motif. Ref.8 |
| Subcellular location | Cytoplasm. Nucleus. Note: Translocated into the nucleus in response to phosphorylation. |
| Post-translational modification | Tyrosine phosphorylated following stimulation by IL-4 and IL-3 By similarity. |
| Sequence similarities | Belongs to the transcription factor STAT family. Contains 1 SH2 domain. |
Ontologies
Binary interactions
With | Entry | #Exp. | IntAct | Notes |
|---|---|---|---|---|
| itself | 2 | EBI-1186478,EBI-1186478 | ||
| TBK1 | Q9UHD2 | 7 | EBI-1186478,EBI-356402 | |
| TMEM173 | Q86WV6 | 12 | EBI-1186478,EBI-2800345 |
Alternative products
| This entry describes 3 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: P42226-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: P42226-2) The sequence of this isoform differs from the canonical sequence as follows: 1-174: Missing. 175-177: PSE → MEQ | ||||||
| Isoform 3 (identifier: P42226-3) The sequence of this isoform differs from the canonical sequence as follows: 1-110: Missing. | ||||||
| Note: No experimental confirmation available. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||||
Molecule processing | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 847 | 847 | Signal transducer and activator of transcription 6 | PRO_0000182433 | |||||||
Regions | |||||||||||
| Domain | 517 – 632 | 116 | SH2 | ||||||||
| Motif | 802 – 806 | 5 | LXXLL motif | ||||||||
Amino acid modifications | |||||||||||
| Modified residue | 641 | 1 | Phosphotyrosine; by JAK By similarity | ||||||||
Natural variations | |||||||||||
| Alternative sequence | 1 – 174 | 174 | Missing in isoform 2. | VSP_031871 | |||||||
| Alternative sequence | 1 – 110 | 110 | Missing in isoform 3. | VSP_045282 | |||||||
| Alternative sequence | 175 – 177 | 3 | PSE → MEQ in isoform 2. | VSP_031872 | |||||||
| Natural variant | 181 | 1 | M → R. Ref.5 Corresponds to variant rs3024952 [ dbSNP | Ensembl ]. | VAR_013094 | |||||||
| Natural variant | 419 | 1 | D → N. Corresponds to variant rs11172102 [ dbSNP | Ensembl ]. | VAR_059812 | |||||||
Experimental info | |||||||||||
| Mutagenesis | 802 | 1 | L → A: Abolishes the interaction with NCOA1; when associated with A-805. Ref.8 | ||||||||
| Mutagenesis | 805 | 1 | L → A: Abolishes the interaction with NCOA1; when associated with A-802. Ref.8 | ||||||||
| Sequence conflict | 149 | 1 | E → Q in AAC67525. Ref.2 | ||||||||
| Sequence conflict | 246 | 1 | G → D in BAH14513. Ref.4 | ||||||||
| Sequence conflict | 733 | 1 | S → N in AAC67525. Ref.2 | ||||||||
Secondary structure | |||||||||||
Helix Strand Turn | |||||||||||
| Helix | 799 – 807 | 9 | |||||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "An interleukin-4-induced transcription factor: IL-4 Stat." Hou J., Schindler U., Henzel W.J., Ho T., Brasseur M., McKnight S.L. Science 265:1701-1706(1994) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1). |
| [2] | "Localization of the human stat6 gene to chromosome 12q13.3-q14.1, a region implicated in multiple solid tumors." Patel B.K., Keck C.L., O'Leary R.S., Popescu N.C., LaRochelle W.J. Genomics 52:192-200(1998) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. |
| [3] | "STAT6 mRNA, nirs splice variant 2." Tabata Y., Sameshima E., Hayashi A., Iida K., Mitsuyama M., Kanai S., Furuya T., Saito T. Submitted (FEB-2003) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 2). |
| [4] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 3). Tissue: Tongue. |
| [5] | SeattleSNPs variation discovery resource Submitted (OCT-2001) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], VARIANT ARG-181. |
| [6] | "The finished DNA sequence of human chromosome 12." Scherer S.E., Muzny D.M., Buhay C.J., Chen R., Cree A., Ding Y., Dugan-Rocha S., Gill R., Gunaratne P., Harris R.A., Hawes A.C., Hernandez J., Hodgson A.V., Hume J., Jackson A., Khan Z.M., Kovar-Smith C., Lewis L.R. Gibbs R.A.Nature 440:346-351(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [7] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). Tissue: Uterus. |
| [8] | "An LXXLL motif in the transactivation domain of STAT6 mediates recruitment of NCoA-1/SRC-1." Litterst C.M., Pfitzner E. J. Biol. Chem. 277:36052-36060(2002) [PubMed] [Europe PMC] [Abstract] Cited for: INTERACTION WITH NCOA1, MUTAGENESIS OF LEU-802 AND LEU-805. |
| [9] | "Structure of the NCoA-1/SRC-1 PAS-B domain bound to the LXXLL motif of the STAT6 transactivation domain." Razeto A., Ramakrishnan V., Litterst C.M., Giller K., Griesinger C., Carlomagno T., Lakomek N., Heimburg T., Lodrini M., Pfitzner E., Becker S. J. Mol. Biol. 336:319-329(2004) [PubMed] [Europe PMC] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (2.2 ANGSTROMS) OF 795-808 IN COMPLEX WITH 257-385 OF NCOA1. |
| + | Additional computationally mapped references. |
Web resources
Cross-references
Sequence databases | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EMBL GenBank DDBJ | U16031 mRNA. Translation: AAA57193.1. AF067575, AF067572, AF067573 Genomic DNA. Translation: AAC67525.1. AB103089 mRNA. Translation: BAD89432.1. AK290431 mRNA. Translation: BAF83120.1. AK316142 mRNA. Translation: BAH14513.1. AF417842 Genomic DNA. Translation: AAL06595.1. AC023237 Genomic DNA. No translation available. BC075852 mRNA. Translation: AAH75852.1. | ||||||||||||
| IPI | IPI00030782. IPI00792907. | ||||||||||||
| PIR | A54740. | ||||||||||||
| RefSeq | NP_001171549.1. NM_001178078.1. NP_001171550.1. NM_001178079.1. NP_001171551.1. NM_001178080.1. NP_003144.3. NM_003153.4. | ||||||||||||
| UniGene | Hs.524518. | ||||||||||||
3D structure databases | |||||||||||||
| PDBe RCSB PDB PDBj |
| ||||||||||||
| ProteinModelPortal | P42226. | ||||||||||||
| ModBase | Search... | ||||||||||||
Protein-protein interaction databases | |||||||||||||
| IntAct | P42226. 29 interactions. | ||||||||||||
| STRING | 9606.ENSP00000300134. | ||||||||||||
PTM databases | |||||||||||||
| PhosphoSite | P42226. | ||||||||||||
Polymorphism databases | |||||||||||||
| DMDM | 1174459. | ||||||||||||
Proteomic databases | |||||||||||||
| PaxDb | P42226. | ||||||||||||
| PRIDE | P42226. | ||||||||||||
Protocols and materials databases | |||||||||||||
| DNASU | 6778. | ||||||||||||
| StructuralBiologyKnowledgebase | Search... | ||||||||||||
Genome annotation databases | |||||||||||||
| Ensembl | ENST00000300134; ENSP00000300134; ENSG00000166888. ENST00000454075; ENSP00000401486; ENSG00000166888. ENST00000535201; ENSP00000441002; ENSG00000166888. ENST00000537215; ENSP00000444530; ENSG00000166888. ENST00000538913; ENSP00000445409; ENSG00000166888. ENST00000543873; ENSP00000438451; ENSG00000166888. ENST00000556155; ENSP00000451742; ENSG00000166888. | ||||||||||||
| GeneID | 6778. | ||||||||||||
| KEGG | hsa:6778. | ||||||||||||
| UCSC | uc001sna.3. human. | ||||||||||||
Organism-specific databases | |||||||||||||
| CTD | 6778. | ||||||||||||
| GeneCards | GC12M057489. | ||||||||||||
| HGNC | HGNC:11368. STAT6. | ||||||||||||
| HPA | HPA001861. | ||||||||||||
| MIM | 601512. gene. | ||||||||||||
| neXtProt | NX_P42226. | ||||||||||||
| PharmGKB | PA339. | ||||||||||||
| GenAtlas | Search... | ||||||||||||
Phylogenomic databases | |||||||||||||
| eggNOG | NOG278979. | ||||||||||||
| HOGENOM | HOG000230988. | ||||||||||||
| HOVERGEN | HBG107486. | ||||||||||||
| InParanoid | P42226. | ||||||||||||
| KO | K11225. | ||||||||||||
| OMA | KFQAGVR. | ||||||||||||
| OrthoDB | EOG4J6RQ5. | ||||||||||||
| PhylomeDB | P42226. | ||||||||||||
Enzyme and pathway databases | |||||||||||||
| Pathway_Interaction_DB | il12_2pathway. IL12-mediated signaling events. il4_2pathway. IL4-mediated signaling events. | ||||||||||||
| Reactome | REACT_111102. Signal Transduction. | ||||||||||||
Gene expression databases | |||||||||||||
| ArrayExpress | P42226. | ||||||||||||
| Bgee | P42226. | ||||||||||||
| CleanEx | HS_STAT6. | ||||||||||||
| Genevestigator | P42226. | ||||||||||||
| GermOnline | ENSG00000166888. Homo sapiens. | ||||||||||||
Family and domain databases | |||||||||||||
| Gene3D | 1.10.238.10. 1 hit. 1.10.532.10. 1 hit. 1.20.1050.20. 1 hit. 2.60.40.630. 1 hit. 3.30.505.10. 1 hit. | ||||||||||||
| InterPro | IPR011992. EF-hand-like_dom. IPR008967. p53-like_TF_DNA-bd. IPR000980. SH2. IPR013800. STAT_TF_alpha. IPR015988. STAT_TF_coiled-coil. IPR001217. STAT_TF_core. IPR013801. STAT_TF_DNA-bd. IPR012345. STAT_TF_DNA-bd_sub. IPR013799. STAT_TF_prot_interaction. [Graphical view] | ||||||||||||
| PANTHER | PTHR11801. PTHR11801. 1 hit. | ||||||||||||
| Pfam | PF00017. SH2. 1 hit. PF01017. STAT_alpha. 1 hit. PF02864. STAT_bind. 1 hit. PF02865. STAT_int. 1 hit. [Graphical view] | ||||||||||||
| SMART | SM00252. SH2. 1 hit. SM00964. STAT_int. 1 hit. [Graphical view] | ||||||||||||
| SUPFAM | SSF49417. P53_like_DNA_bnd. 1 hit. SSF47655. STAT. 1 hit. SSF48092. STAT. 1 hit. | ||||||||||||
| PROSITE | PS50001. SH2. 1 hit. [Graphical view] | ||||||||||||
| ProtoNet | Search... | ||||||||||||
Other | |||||||||||||
| BindingDB | P42226. | ||||||||||||
| ChEMBL | CHEMBL5401. | ||||||||||||
| ChiTaRS | STAT6. human. | ||||||||||||
| EvolutionaryTrace | P42226. | ||||||||||||
| GenomeRNAi | 6778. | ||||||||||||
| NextBio | 26458. | ||||||||||||
| SOURCE | Search... | ||||||||||||
Entry information
| Entry name | STAT6_HUMAN | ||||||||
| Accession | Primary (citable) accession number: P42226 Secondary accession number(s): A8K316 Q71UP4 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 12 Human chromosome 12: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| PDB cross-references Index of Protein Data Bank (PDB) cross-references |
| SIMILARITY comments Index of protein domains and families |

Clusters with
