Reviewed, UniProtKB/Swiss-Prot P41994 (RPIA_CAEEL)

Names and origin

Protein names

Recommended name:
    Probable-ribose 5-phosphate isomerase
    EC=5.3.1.6
Alternative name(s):
    Phosphoriboisomerase

Gene names

ORF Names:

B0280.3

Organism

Caenorhabditis elegans [Complete proteome]

Taxonomic identifier

6239 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	251 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

General annotation (Comments)

Catalytic activity	D-ribose 5-phosphate = D-ribulose 5-phosphate.
Pathway	Carbohydrate degradation; pentose phosphate pathway; D-ribose 5-phosphate from D-ribulose 5-phosphate (non-oxidative stage): step 1/1.
Sequence similarities	Belongs to the ribose 5-phosphate isomerase family.

Ontologies

Keywords
Molecular function	Isomerase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	locomotion Inferred from mutant phenotype. Source: WormBase pentose-phosphate shunt, non-oxidative branch Inferred from electronic annotation. Source: InterPro
Molecular function	ribose-5-phosphate isomerase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 251	251	Probable-ribose 5-phosphate isomerase		PRO_0000158523

Sequences

	Sequence		Length	Mass (Da)
	P41994-1 [UniParc]. Last modified November 1, 1995. Version 1. Checksum: F6849D1224626B68	FASTA	251	27,221
	10 20 30 40 50 60 MVTSTGPEAE LAPIEQAKKR AAFACGEKYV QSGCRLGVGS GSTVKYLVEY LKQGFQNGSL 70 80 90 100 110 120 KDIICVPTSF LTKQWLIESG LPVSDLDSHP ELDVCIDGAD EVDGQFTCIK GGGGCLAQEK 130 140 150 160 170 180 IVQTAAKNFY VIADYLKDSK HLGDRYPNVP IEVLPLAAQP LLRSIPRAEG GSCQLRQAVK 190 200 210 220 230 240 KCGPIVTDNG NFIIDWQFEK NVSGRDWFAI QQRLANTPGI VETGLFIGCV DAVFFAYSDG 250 SVKEIVNSKK H

References

[1]	"Genome sequence of the nematode C. elegans: a platform for investigating biology." The C. elegans sequencing consortium Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bristol N2.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBLGenBankDDBJ	U10438 Genomic DNA. Translation: AAA19091.1.
PIR	T15307.
RefSeq	NP_498556.1.
UniGene	Cel.8462
3D structure databases
HSSP	HSSP built from PDB template 1LK5 based on UniProtKB O50083.
ModBase	Search...
Protein-protein interaction databases
IntAct	P41994. 3 interactions.
STRING	P41994.
Genome annotation databases
Ensembl	B0280.3.1; B0280.3.1; B0280.3; Caenorhabditis elegans. [Genome view] B0280.3.2; B0280.3.2; B0280.3; Caenorhabditis elegans. [Genome view] B0280.3.3; B0280.3.3; B0280.3; Caenorhabditis elegans. [Genome view]
GeneID	175995.
KEGG	cel:B0280.3.
UCSC	B0280.3.1. c. elegans.
Organism-specific databases
CTD	175995.
WormBase	WBGene00015101. B0280.3.
WormPep	B0280.3. CE00733. [WorfDB]
Phylogenomic databases
OMA	SARNIWI.
Enzyme and pathway databases
BRENDA	5.3.1.6. 672.
Gene expression databases
ArrayExpress	P41994.
Family and domain databases
InterPro	IPR004788. RpiA. [Graphical view]
PANTHER	PTHR11934. RpiA. 1 hit.
Pfam	PF06026. Rib_5-P_isom_A. 1 hit. [Graphical view]
ProDom	PD005813. RpiA. 1 hit. [Graphical view] [Entries sharing at least one domain]
TIGRFAMs	TIGR00021. rpiA. 1 hit.
ProtoNet	Search...
Other Resources
NextBio	890654.

Entry information

Entry name

RPIA_CAEEL

Accession

Primary (citable) accession number: P41994

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 1, 1995
Last sequence update:	November 1, 1995
Last modified:	November 3, 2009
This is version 54 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

Caenorhabditis annotation project