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Protein

Protein translation factor SUI1 homolog 1

Gene

At4g27130

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Probably involved in translation.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processProtein biosynthesis, Translation regulation

Names & Taxonomyi

Protein namesi
Recommended name:
Protein translation factor SUI1 homolog 1
Gene namesi
Ordered Locus Names:At4g27130
ORF Names:F20D21.11, T24A18.80
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

AraportiAT4G27130.
TAIRilocus:2136462. AT4G27130.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemovedCombined sources
ChainiPRO_00001305672 – 113Protein translation factor SUI1 homolog 1Add BLAST112

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei2N-acetylserineCombined sources1

Keywords - PTMi

Acetylation

Proteomic databases

PaxDbiP41568.

PTM databases

iPTMnetiP41568.

Expressioni

Gene expression databases

ExpressionAtlasiP41568. baseline and differential.
GenevisibleiP41568. AT.

Interactioni

Protein-protein interaction databases

BioGridi14108. 3 interactors.
IntActiP41568. 2 interactors.
STRINGi3702.AT4G27130.1.

Structurei

3D structure databases

ProteinModelPortaliP41568.
SMRiP41568.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the SUI1 family.Curated

Phylogenomic databases

eggNOGiKOG1770. Eukaryota.
COG0023. LUCA.
HOGENOMiHOG000279813.
InParanoidiP41568.
KOiK03113.
OMAiQPTNYIH.
OrthoDBiEOG09360QTH.
PhylomeDBiP41568.

Family and domain databases

CDDicd11566. eIF1_SUI1. 1 hit.
Gene3Di3.30.780.10. 1 hit.
InterProiView protein in InterPro
IPR001950. SUI1.
IPR005874. SUI1_euk.
PfamiView protein in Pfam
PF01253. SUI1. 1 hit.
PIRSFiPIRSF004499. SUI1_euk. 1 hit.
SUPFAMiSSF55159. SSF55159. 1 hit.
TIGRFAMsiTIGR01160. SUI1_MOF2. 1 hit.
PROSITEiView protein in PROSITE
PS50296. SUI1. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P41568-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSELDSQVPT AFDPFADANA EDSGAGTKEY VHIRVQQRNG RKSLTTVQGL
60 70 80 90 100
KKEYSYTKIL KDLKKEFCCN GTVVQDSELG QVIQLQGDQR KNVSTFLVQA
110
GLVKKDNIKI HGF
Length:113
Mass (Da):12,592
Last modified:November 1, 1997 - v2
Checksum:iC2A4B16864DFFBF0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U81042 Genomic DNA. Translation: AAB68033.1.
AL035680 Genomic DNA. Translation: CAB38843.1.
AL161566 Genomic DNA. Translation: CAB79568.1.
CP002687 Genomic DNA. Translation: AEE85305.1.
AY037234 mRNA. Translation: AAK59834.1.
AY060537 mRNA. Translation: AAL31168.1.
AY088288 mRNA. Translation: AAM65827.1.
PIRiT06043.
RefSeqiNP_194443.1. NM_118847.4.
UniGeneiAt.2857.

Genome annotation databases

EnsemblPlantsiAT4G27130.1; AT4G27130.1; AT4G27130.
GeneIDi828821.
GrameneiAT4G27130.1; AT4G27130.1; AT4G27130.
KEGGiath:AT4G27130.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiSUI11_ARATH
AccessioniPrimary (citable) accession number: P41568
Secondary accession number(s): Q9SLK5
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: November 1, 1997
Last modified: June 7, 2017
This is version 111 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. Translation initiation factors
    List of translation initiation factor entries
  3. SIMILARITY comments
    Index of protein domains and families