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P41345 (FENR2_ORYSJ) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 91. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
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to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Ferredoxin--NADP reductase, root isozyme, chloroplastic
Short name=FNR
EC=1.18.1.2
Gene names
Ordered Locus Names:Os03g0784700, LOC_Os03g57120
ORF Names:OSJNBb0093E13.2
OrganismOryza sativa subsp. japonica (Rice)
Taxonomic identifier39947 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › BEP clade › Ehrhartoideae › Oryzeae › Oryza

Protein attributes

Sequence length378 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

May play a key role in regulating the relative amounts of cyclic and non-cyclic electron flow to meet the demands of the plant for ATP and reducing power. Is involved in nitrate assimilation.

Catalytic activity

2 reduced ferredoxin + NADP+ + H+ = 2 oxidized ferredoxin + NADPH.

Cofactor

FAD.

Pathway

Energy metabolism; photosynthesis.

Subcellular location

Plastid › chloroplast By similarity.

Induction

By nitrate.

Sequence similarities

Belongs to the ferredoxin--NADP reductase type 1 family.

Contains 1 FAD-binding FR-type domain.

Sequence caution

The sequence BAA02248.1 differs from that shown. Reason: Erroneous initiation.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Transit peptide1 – 6262Chloroplast Ref.1
Chain63 – 378316Ferredoxin--NADP reductase, root isozyme, chloroplastic
PRO_0000019414

Regions

Domain93 – 221129FAD-binding FR-type
Nucleotide binding153 – 1564FAD By similarity
Nucleotide binding174 – 1763FAD By similarity
Nucleotide binding195 – 1973FAD By similarity
Nucleotide binding269 – 2702NADP By similarity
Nucleotide binding299 – 3002NADP By similarity
Nucleotide binding337 – 3382NADP By similarity

Sites

Binding site1561NADP By similarity
Binding site1761NADP By similarity
Binding site1801FAD By similarity
Binding site2371FAD By similarity
Binding site2371NADP; via amide nitrogen By similarity
Binding site3091NADP By similarity
Binding site3761NADP By similarity

Sequences

Sequence LengthMass (Da)Tools
P41345 [UniParc].

Last modified February 1, 1995. Version 1.
Checksum: C780A10189D7AD2B

FASTA37841,878
        10         20         30         40         50         60 
MATAVASQVA VSAPAGSDRG LRSSGIQGSN NISFSNKSWV GTTLAWESKA TRPRHANKVL 

        70         80         90        100        110        120 
CMSVQQASES KVAVKPLDLE SANEPPLNTY KPKEPYTATI VSVERIVGPK APGETCHIVI 

       130        140        150        160        170        180 
DHGGNVPYWE GQSYGIIPPG ENPKKPGAPH NVRLYSIAST RYGDSFDGRT TSLCVRRAVY 

       190        200        210        220        230        240 
YDPETGKEDP SKNGVCSNFL CNSKPGDKVK VTGPSGKIML LPEEDPNATH IMIATGTGVA 

       250        260        270        280        290        300 
PFRGYLRRMF MEDVPKYRFG GLAWLFLGVA NTDSLLYDEE FTSYLKQYPD NFRYDKALSR 

       310        320        330        340        350        360 
EQKNKNAGKM YVQDKIEEYS DEIFKLLDGG AHIYFCGLKG MMPGIQDTLK KVAEQRGESW 

       370 
EQKLSQLKKN KQWHVEVY

« Hide

References

« Hide 'large scale' references
[1]"Nucleotide sequence of a rice root ferredoxin-NADP+ reductase cDNA and its induction by nitrate."
Aoki H., Ida S.
Biochim. Biophys. Acta 1183:553-556(1994) [PubMed: 8286405] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA], PROTEIN SEQUENCE OF 63-72.
Strain: cv. Kinmaze.
Tissue: Root.
[2]"The genomic organization of the gene encoding a nitrate-inducible ferredoxin-NADP+ oxidoreductase from rice roots."
Aoki H., Ida S., Tanaka K.
Biochim. Biophys. Acta 1229:389-392(1995) [PubMed: 7748889] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: cv. Nipponbare.
[3]"Sequence, annotation, and analysis of synteny between rice chromosome 3 and diverged grass species."
The rice chromosome 3 sequencing consortium
Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B., Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T., Fadrosh D., Bera J., Weaver B., Jin S. expand/collapse author list , Johri S., Reardon M., Webb K., Hill J., Moffat K., Tallon L., Van Aken S., Lewis M., Utterback T., Feldblyum T., Zismann V., Iobst S., Hsiao J., de Vazeille A.R., Salzberg S.L., White O., Fraser C.M., Yu Y., Kim H., Rambo T., Currie J., Collura K., Kernodle-Thompson S., Wei F., Kudrna K., Ammiraju J.S.S., Luo M., Goicoechea J.L., Wing R.A., Henry D., Oates R., Palmer M., Pries G., Saski C., Simmons J., Soderlund C., Nelson W., de la Bastide M., Spiegel L., Nascimento L., Huang E., Preston R., Zutavern T., Palmer L., O'Shaughnessy A., Dike S., McCombie W.R., Minx P., Cordum H., Wilson R., Jin W., Lee H.R., Jiang J., Jackson S.
Genome Res. 15:1284-1291(2005) [PubMed: 16109971] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		D12815 mRNA. Translation: BAA02248.1. Different initiation.
D17410 mRNA. Translation: BAA04232.1.
D38445 Genomic DNA. Translation: BAA07479.1.
AC091123 Genomic DNA. Translation: AAK72892.1.
PIRT03758.
RefSeqNP_001051476.1. NM_001058011.1.
UniGeneOs.141.

3D structure databases

ProteinModelPortalP41345.
SMRP41345. Positions 68-378.
ModBaseSearch...

Protein-protein interaction databases

STRINGP41345.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsLOC_Os03g57120.1; LOC_Os03g57120.1; LOC_Os03g57120.
GeneID4334338.
KEGGosa:4334338.

Organism-specific databases

GrameneP41345.

Phylogenomic databases

OMAEDPNATH.
PhylomeDBP41345.
ProtClustDBPLN03116.

Family and domain databases

InterProIPR017927. Fd_Rdtase_FAD-bd.
IPR015701. Fd_Red.
IPR001709. Flavoprot_Pyr_Nucl_cyt_Rdtase.
IPR012146. FNR.
IPR008333. OxRdtase_FAD-bd_dom.
IPR001433. OxRdtase_FAD/NAD-bd.
IPR017938. Riboflavin_synthase-like_b-brl.
[Graphical view]
KOK02641.
PANTHERPTHR19384:SF1. FRD_Red. 1 hit.
PfamPF00970. FAD_binding_6. 1 hit.
PF00175. NAD_binding_1. 1 hit.
[Graphical view]
PIRSFPIRSF000361. Frd-NADP+_RD. 1 hit.
PRINTSPR00371. FPNCR.
SUPFAMSSF63380. Riboflavin_synthase_like_b-brl. 1 hit.
PROSITEPS51384. FAD_FR. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameFENR2_ORYSJ
AccessionPrimary (citable) accession number: P41345
Secondary accession number(s): Q7G7H4, Q9SB29
Entry history
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: February 1, 1995
Last modified: January 25, 2012
This is version 91 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

Oryza sativa (rice)

Index of Oryza sativa entries and their corresponding gene designations

PATHWAY comments

Index of metabolic and biosynthesis pathways

SIMILARITY comments

Index of protein domains and families

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