P41344 (FENR1_ORYSJ) Reviewed, UniProtKB/Swiss-Prot
Last modified
January 25, 2012.
Version 87.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Ferredoxin--NADP reductase, leaf isozyme, chloroplastic Short name=FNR EC=1.18.1.2 | ||||
| Gene names |
| ||||
| Organism | Oryza sativa subsp. japonica (Rice) | ||||
| Taxonomic identifier | 39947 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › BEP clade › Ehrhartoideae › Oryzeae › Oryza |
Protein attributes
| Sequence length | 362 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at transcript level |
General annotation (Comments)
| Function | May play a key role in regulating the relative amounts of cyclic and non-cyclic electron flow to meet the demands of the plant for ATP and reducing power. |
| Catalytic activity | 2 reduced ferredoxin + NADP+ + H+ = 2 oxidized ferredoxin + NADPH. |
| Cofactor | FAD. |
| Pathway | |
| Subcellular location | Plastid › chloroplast stroma. Plastid › chloroplast thylakoid membrane; Peripheral membrane protein; Stromal side Probable. Note: In the vicinity of the photosystem I in the non-stacked and fringe portion of the membrane. |
| Sequence similarities | Belongs to the ferredoxin--NADP reductase type 1 family. Contains 1 FAD-binding FR-type domain. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Electron transport Photosynthesis Transport |
| Cellular component | Chloroplast Membrane Plastid Thylakoid |
| Domain | Transit peptide |
| Ligand | FAD Flavoprotein NADP |
| Molecular function | Oxidoreductase |
| Gene Ontology (GO) | |
| Biological process | transport Inferred from electronic annotation. Source: UniProtKB-KW |
| Cellular component | chloroplast stroma Inferred from electronic annotation. Source: UniProtKB-SubCell chloroplast thylakoid membraneInferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular function | NADP binding Inferred from electronic annotation. Source: InterPro ferredoxin-NADP+ reductase activityInferred from electronic annotation. Source: EC flavin adenine dinucleotide bindingInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Transit peptide | 1 – 62 | 62 | Chloroplast Potential | ||||||
| Chain | 63 – 362 | 300 | Ferredoxin--NADP reductase, leaf isozyme, chloroplastic | PRO_0000019409 | |||||
Regions | |||||||||
| Domain | 83 – 205 | 123 | FAD-binding FR-type | ||||||
| Nucleotide binding | 141 – 144 | 4 | FAD By similarity | ||||||
| Nucleotide binding | 162 – 164 | 3 | FAD By similarity | ||||||
| Nucleotide binding | 179 – 181 | 3 | FAD By similarity | ||||||
| Nucleotide binding | 252 – 253 | 2 | NADP By similarity | ||||||
| Nucleotide binding | 282 – 283 | 2 | NADP By similarity | ||||||
| Nucleotide binding | 321 – 322 | 2 | NADP By similarity | ||||||
Sites | |||||||||
| Binding site | 144 | 1 | NADP By similarity | ||||||
| Binding site | 164 | 1 | NADP By similarity | ||||||
| Binding site | 168 | 1 | FAD By similarity | ||||||
| Binding site | 220 | 1 | FAD By similarity | ||||||
| Binding site | 220 | 1 | NADP; via amide nitrogen By similarity | ||||||
| Binding site | 292 | 1 | NADP By similarity | ||||||
| Binding site | 360 | 1 | NADP By similarity | ||||||
Sequences
| ||||||||||||||||||
References
| « Hide 'large scale' references | |
| [1] | "Sequence of a cDNA encoding rice (Oryza sativa L.) leaf ferredoxin-NADP+ reductase." Aoki H., Doyama N., Ida S. Plant Physiol. 104:1473-1474(1994) [PubMed: 8016278] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA]. Strain: cv. Kinmaze. Tissue: Leaf. |
| [2] | "The map-based sequence of the rice genome." International rice genome sequencing project (IRGSP) Nature 436:793-800(2005) [PubMed: 16100779] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nipponbare. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | D17790 mRNA. Translation: BAA04616.1. AP000616 Genomic DNA. Translation: BAA85425.1. AP001129 Genomic DNA. Translation: BAA90642.1. |
| PIR | T04349. |
| RefSeq | NP_001056570.1. NM_001063105.1. |
| UniGene | Os.10696. |
3D structure databases | |
| ProteinModelPortal | P41344. |
| SMR | P41344. Positions 58-362. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | P41344. |
Proteomic databases | |
| PRIDE | P41344. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblPlants | LOC_Os06g01850.1; LOC_Os06g01850.1; LOC_Os06g01850. |
| GeneID | 4339874. |
| KEGG | osa:4339874. |
Organism-specific databases | |
| Gramene | P41344. |
Phylogenomic databases | |
| OMA | GRMYIQD. |
| PhylomeDB | P41344. |
| ProtClustDB | PLN03115. |
Family and domain databases | |
| InterPro | IPR017927. Fd_Rdtase_FAD-bd. IPR015701. Fd_Red. IPR001709. Flavoprot_Pyr_Nucl_cyt_Rdtase. IPR012146. FNR. IPR008333. OxRdtase_FAD-bd_dom. IPR001433. OxRdtase_FAD/NAD-bd. IPR017938. Riboflavin_synthase-like_b-brl. [Graphical view] |
| KO | K02641. |
| PANTHER | PTHR19384:SF1. FRD_Red. 1 hit. |
| Pfam | PF00970. FAD_binding_6. 1 hit. PF00175. NAD_binding_1. 1 hit. [Graphical view] |
| PIRSF | PIRSF000361. Frd-NADP+_RD. 1 hit. |
| PRINTS | PR00371. FPNCR. |
| SUPFAM | SSF63380. Riboflavin_synthase_like_b-brl. 1 hit. |
| PROSITE | PS51384. FAD_FR. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | FENR1_ORYSJ | ||||||||
| Accession | Primary (citable) accession number: P41344 Secondary accession number(s): Q7F8E8 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Plant Protein Annotation Program | ||||||||
Relevant documents
| Oryza sativa (rice) Index of Oryza sativa entries and their corresponding gene designations |
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

Clusters with