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P41268

- NCAP_PUUME

UniProt

P41268 - NCAP_PUUME

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Protein
Nucleoprotein
Gene
N
Organism
Puumala virus (strain Evo/12CG/93)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Encapsidates the genome protecting it from nucleases. The encapsidated genomic RNA is termed the nucleocapsid (NC) and serves as template for transcription and replication By similarity.

GO - Molecular functioni

  1. RNA binding Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein

Keywords - Ligandi

RNA-binding, Viral nucleoprotein

Names & Taxonomyi

Protein namesi
Recommended name:
Nucleoprotein
Alternative name(s):
Nucleocapsid protein
Short name:
Protein N
Gene namesi
Name:N
OrganismiPuumala virus (strain Evo/12CG/93)
Taxonomic identifieri38999 [NCBI]
Taxonomic lineageiVirusesssRNA negative-strand virusesBunyaviridaeHantavirus
Virus hostiHomo sapiens (Human) [TaxID: 9606]
Myodes glareolus (Bank vole) (Clethrionomys glareolus) [TaxID: 447135]

Subcellular locationi

Virion
Note: Internal protein of virus particle.

GO - Cellular componenti

  1. helical viral capsid Source: UniProtKB-KW
  2. ribonucleoprotein complex Source: UniProtKB-KW
  3. viral nucleocapsid Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Capsid protein, Helical capsid protein, Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 433433Nucleoprotein
PRO_0000222012Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliP41268.
SMRiP41268. Positions 1-74.

Family & Domainsi

Sequence similaritiesi

Family and domain databases

InterProiIPR002214. Hanta_nucleocap.
[Graphical view]
PfamiPF00846. Hanta_nucleocap. 1 hit.
[Graphical view]
PIRSFiPIRSF003949. N_HantaV. 1 hit.
ProDomiPD001501. Hanta_nucleocap. 1 hit.
[Graphical view] [Entries sharing at least one domain]

Sequencei

Sequence statusi: Complete.

P41268-1 [UniParc]FASTAAdd to Basket

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MSDLTDIQED ITRHEQQLVV ARQKLKDAER AVEVDPDDVN KNTLQARQQT    50
VSALEDKLAD YKRRMADAVS RKKMDTKPTD PTGIEPDDHL KERSSLRYGN 100
VLDVNAIDIE EPSGQTADWY TIGVYVIGFT IPIILKALYM LSTRGRQTVK 150
ENKGTRIRFK DDTSFEDING IRRPKHLYVS MPTAQSTMKA EELTPGRFRT 200
IVCGLFPTQI QVRNIMSPVM GVIGFSFFVK DWPERIREFM EKECPFIKPE 250
IKPGTPAQEM EMLKRNKIYF MQRQDVLDKN HVADIDKLID YAASGDPTSP 300
DNIDSPNAPW VFACAPDRCP PTCIYVAGMA ELGAFFSILQ DMRNTIMASK 350
TVGTAEEKLR KKSSFYQSYL RRTQSMGIQL DQRIILLFML EWGKEMVDHF 400
HLGDDMDPEL RGLAQALIDQ KVKEISNQEP LKI 433
Length:433
Mass (Da):49,508
Last modified:February 1, 1995 - v1
Checksum:iEF2B4DF273132F93
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
Z30703 Genomic RNA. Translation: CAA83188.1.
Z30702 Genomic RNA. Translation: CAA83187.1.
PIRiS43008.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
Z30703 Genomic RNA. Translation: CAA83188.1 .
Z30702 Genomic RNA. Translation: CAA83187.1 .
PIRi S43008.

3D structure databases

ProteinModelPortali P41268.
SMRi P41268. Positions 1-74.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Family and domain databases

InterProi IPR002214. Hanta_nucleocap.
[Graphical view ]
Pfami PF00846. Hanta_nucleocap. 1 hit.
[Graphical view ]
PIRSFi PIRSF003949. N_HantaV. 1 hit.
ProDomi PD001501. Hanta_nucleocap. 1 hit.
[Graphical view ] [Entries sharing at least one domain ]
ProtoNeti Search...

Publicationsi

  1. "Genetic variation of wild Puumala viruses within the serotype, local rodent populations and individual animal."
    Plyusnin A., Vapalahti O., Lehvaeslaiho H., Apekina N., Mikhailova T., Gavilovskaya I., Laakkonen J., Niemimaa J., Henttonen H., Brummer-Korvenkontio M., Vaheri A.
    Virus Res. 38:25-41(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Entry informationi

Entry nameiNCAP_PUUME
AccessioniPrimary (citable) accession number: P41268
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: February 1, 1995
Last modified: October 16, 2013
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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