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P41188 (RL7_BUCAP) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 75. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
50S ribosomal protein L7/L12
Gene names
Name:rplL
Ordered Locus Names:BUsg_036
OrganismBuchnera aphidicola subsp. Schizaphis graminum (strain Sg) [Complete proteome] [HAMAP]
Taxonomic identifier198804 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera

Protein attributes

Sequence length122 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Seems to be the binding site for several of the factors involved in protein synthesis and appears to be essential for accurate translation By similarity. HAMAP MF_00368

Sequence similarities

Belongs to the ribosomal protein L12P family.

Ontologies

Keywords
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processtranslation

Inferred from electronic annotation. Source: InterPro

   Cellular componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular functionstructural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 12212250S ribosomal protein L7/L12 HAMAP MF_00368
PRO_0000157511

Sequences

Sequence LengthMass (Da)Tools
P41188 [UniParc].

Last modified August 30, 2002. Version 2.
Checksum: CA7721D77FB06EC5

FASTA12213,267
        10         20         30         40         50         60 
MSITKEQILE AVSEMSVMNV VELISAMEKK FGVSANMSVN TNNNSEKSTI EEKTEFDIFL 

        70         80         90        100        110        120 
KSIGPNKVSV IKSVRSATGL GLKEAKDLVE SAPTVLKENM SKNDAESLKK TLEDAGAEIE 


IK 

« Hide

References

« Hide 'large scale' references
[1]"50 million years of genomic stasis in endosymbiotic bacteria."
Tamas I., Klasson L., Canbaeck B., Naeslund A.K., Eriksson A.-S., Wernegreen J.J., Sandstroem J.P., Moran N.A., Andersson S.G.E.
Science 296:2376-2379(2002) [PubMed: 12089438] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Sg.
[2]"Sequence analysis of an aphid endosymbiont DNA fragment containing rpoB (beta-subunit of RNA polymerase) and portions of rplL and rpoC."
Clark M.A., Baumann L., Baumann P.
Curr. Microbiol. 25:283-290(1992) [PubMed: 1369199] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 88-122.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE013218 Genomic DNA. Translation: AAM67607.1.
Z11913 Genomic DNA. Translation: CAA77969.1.
PIRS32679.
RefSeqNP_660396.2. NC_004061.1.

3D structure databases

ProteinModelPortalP41188.
SMRP41188. Positions 2-122.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBBUCT00000000503; EBBUCP00000000503; EBBUCG00000000503.
GeneID1005852.
GenomeReviewsGene locus BUsg_036 in contig AE013218_GR.
KEGGbas:BUsg036.
PATRIC21246829. VBIBucAph100086_0036.

Organism-specific databases

CMRSearch...

Phylogenomic databases

GeneTreeEBGT00050000008197.
HOGENOMHBG746222.
OMAGAKTMEV.
ProtClustDBPRK00157.

Enzyme and pathway databases

BioCycBAPH198804:BUSG036-MONOMER.

Family and domain databases

HAMAPMF_00368. Ribosomal_L7_L12.
[Tree]
InterProIPR000206. Ribosomal_L7/12.
IPR014719. Ribosomal_L7/12_C/ClpS-like.
IPR013823. Ribosomal_L7/L12_C.
IPR008932. Ribosomal_L7/L12_oligo.
[Graphical view]
Gene3DG3DSA:3.30.1390.10. Ribosomal_L7/12_C/ClpS-like. 1 hit.
KOK02935.
PfamPF00542. Ribosomal_L12. 1 hit.
[Graphical view]
ProDomPD001326. Ribosomal_L7/L12_C. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMSSF48300. Ribosomal_L12/7. 1 hit.
SSF54736. Ribosomal_L7/12_C/ClpS-like. 1 hit.
TIGRFAMsTIGR00855. L12. 1 hit.
ProtoNetSearch...

Entry information

Entry nameRL7_BUCAP
AccessionPrimary (citable) accession number: P41188
Entry history
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: August 30, 2002
Last modified: January 25, 2012
This is version 75 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Ribosomal proteins

Ribosomal proteins families and list of entries

Buchnera aphidicola (subsp. Schizaphis graminum)

Buchnera aphidicola (subsp. Schizaphis graminum): entries and gene names

SIMILARITY comments

Index of protein domains and families